PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7UMS

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
4	heavy	Homo.sapiens	Hu_IGHV3-48*03	93.2	Hu_IGHV3-48*03	84.6	H1	13	H1-13-*	-1	AASGFTFSNYEMY	BBAABALAABBBB
4	heavy	Homo.sapiens	Hu_IGHV3-48*03	93.2	Hu_IGHV3-48*03	50.0	H2	10	H2-10-*	-1	YISTSPAITY	BBBLLALBBB
4	heavy	Homo.sapiens	Hu_IGHV3-48*03	93.2	Hu_IGHV3-48*03	50.0	H3	18	H3-18-*	-1	ATISHQQfssgWNAWFDP
4	heavy	Homo.sapiens	Hu_IGHV3-48*03	93.2	Hu_IGHV3-48*03	87.5	H4	8	H4-8-1	19	RDNAKSSL	BBAAALBB
5	lambda	Homo.sapiens	Hu_IGLV6-57*02	92.8	Hu_IGLV6-57*02	100.0	L1	13	L1-13-2	22	TGSSGSIASNYVQ	BBABEBAAABBBB
5	lambda	Homo.sapiens	Hu_IGLV6-57*02	92.8	Hu_IGLV6-57*02	75.0	L2	8	L2-8-1	14	YENYQRPS	BLLABBBB
5	lambda	Homo.sapiens	Hu_IGLV6-57*02	92.8	Hu_IGLV6-57*02	71.4	L3	10	L3-10-*	-1	QSYDNNNLWV	BBBBABBAEB
5	lambda	Homo.sapiens	Hu_IGLV6-57*02	92.8	Hu_IGLV6-57*02	87.5	L4	8	L4-8-1	11	idRSSNSA	BBAAALBB
6	heavy	Homo.sapiens	Hu_IGHV3-48*03	93.2	Hu_IGHV3-48*03	84.6	H1	13	H1-13-*	-1	AASGFTFSNYEMY	BBAABALAABBBB
6	heavy	Homo.sapiens	Hu_IGHV3-48*03	93.2	Hu_IGHV3-48*03	50.0	H2	10	H2-10-*	-1	YISTSPAITY	BBBLLALBBB
6	heavy	Homo.sapiens	Hu_IGHV3-48*03	93.2	Hu_IGHV3-48*03	50.0	H3	18	H3-18-*	-1	ATISHQQfssgWNAWFDP
6	heavy	Homo.sapiens	Hu_IGHV3-48*03	93.2	Hu_IGHV3-48*03	87.5	H4	8	H4-8-1	21	RDNAKSSL	BBAAALBB
7	lambda	Homo.sapiens	Hu_IGLV6-57*02	92.8	Hu_IGLV6-57*02	100.0	L1	13	L1-13-2	20	TGSSGSIASNYVQ	BBABEBAAABBBB
7	lambda	Homo.sapiens	Hu_IGLV6-57*02	92.8	Hu_IGLV6-57*02	75.0	L2	8	L2-8-1	11	YENYQRPS	BLLABBBB
7	lambda	Homo.sapiens	Hu_IGLV6-57*02	92.8	Hu_IGLV6-57*02	71.4	L3	10	L3-10-*	-1	QSYDNNNLWV	BBBBABBAEB
7	lambda	Homo.sapiens	Hu_IGLV6-57*02	92.8	Hu_IGLV6-57*02	87.5	L4	8	L4-8-1	12	idRSSNSA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022