PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7UEM

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Homo.sapiens	Hu_IGKV2-30*01	100.0	Hu_IGKV2-30*01	93.8	L1	16	L1-16-1	7	RSSQSLvysdgNTYLA	BBABBABBAALBBBBB
C	kappa	Homo.sapiens	Hu_IGKV2-30*01	100.0	Hu_IGKV2-30*01	87.5	L2	8	L2-8-*	-1	YRVSNRDS	BLLABBBA
C	kappa	Homo.sapiens	Hu_IGKV2-30*01	100.0	Hu_IGKV2-30*01	71.4	L3	9	L3-9-cis7-1	14	LQGTHGPHT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV2-30*01	100.0	Hu_IGKV2-30*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	61.5	H1	13	H1-13-1	13	AASGFIFRDSWMT	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	60.0	H2	10	H2-10-2	12	DINQGGSHKY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H3	11	H3-11-*	-1	ARDPEFGALDY	BBBABLLBBAB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	87.5	H4	8	H4-8-1	5	RDDAKNSL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	61.5	H1	13	H1-13-1	9	AASGFIFRDSWMT	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	60.0	H2	10	H2-10-2	9	DINQGGSHKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H3	11	H3-11-*	-1	ARDPEFGALDY	BBBABLLBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	87.5	H4	8	H4-8-1	6	RDDAKNSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV2-30*01	100.0	Hu_IGKV2-30*01	93.8	L1	16	L1-16-1	6	RSSQSLvysdgNTYLA	BBABBABBAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV2-30*01	100.0	Hu_IGKV2-30*01	87.5	L2	8	L2-8-*	-1	YRVSNRDS	BLLABBBA
L	kappa	Homo.sapiens	Hu_IGKV2-30*01	100.0	Hu_IGKV2-30*01	71.4	L3	9	L3-9-cis7-1	13	LQGTHGPHT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV2-30*01	100.0	Hu_IGKV2-30*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022