PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7U9G

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	lambda	Homo.sapiens	Hu_IGLV1-47*02	94.1	Hu_IGLV1-47*02	100.0	L1	13	L1-13-1	18	SGSSSNIGSNYVY	BBBAAAAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV1-47*02	94.1	Hu_IGLV1-47*02	50.0	L2	8	L2-8-*	-1	YKSDKRPS	ABAABBBB
D	lambda	Homo.sapiens	Hu_IGLV1-47*02	94.1	Hu_IGLV1-47*02	77.8	L3	11	L3-11-1	14	AAWDNRLSGWL	BBBBAAALBBB
D	lambda	Homo.sapiens	Hu_IGLV1-47*02	94.1	Hu_IGLV1-47*02	83.3	L4	6	L4-6-*	-1	TSGTSA	BBAABB
E	lambda	Homo.sapiens	Hu_IGLV1-47*02	94.1	Hu_IGLV1-47*02	100.0	L1	13	L1-13-1	18	SGSSSNIGSNYVY	BBBAAAAAABBBB
E	lambda	Homo.sapiens	Hu_IGLV1-47*02	94.1	Hu_IGLV1-47*02	50.0	L2	8	L2-8-*	-1	YKSDKRPS	ABAABBBB
E	lambda	Homo.sapiens	Hu_IGLV1-47*02	94.1	Hu_IGLV1-47*02	77.8	L3	11	L3-11-1	14	AAWDNRLSGWL	BBBBAAALBBB
E	lambda	Homo.sapiens	Hu_IGLV1-47*02	94.1	Hu_IGLV1-47*02	83.3	L4	6	L4-6-*	-1	TSGTSA	BBAABB
F	lambda	Homo.sapiens	Hu_IGLV1-47*02	94.1	Hu_IGLV1-47*02	100.0	L1	13	L1-13-1	18	SGSSSNIGSNYVY	BBBAAAAAABBBB
F	lambda	Homo.sapiens	Hu_IGLV1-47*02	94.1	Hu_IGLV1-47*02	50.0	L2	8	L2-8-*	-1	YKSDKRPS	ABAABBBB
F	lambda	Homo.sapiens	Hu_IGLV1-47*02	94.1	Hu_IGLV1-47*02	77.8	L3	11	L3-11-1	14	AAWDNRLSGWL	BBBBAAALBBB
F	lambda	Homo.sapiens	Hu_IGLV1-47*02	94.1	Hu_IGLV1-47*02	83.3	L4	6	L4-6-*	-1	TSGTSA	BBAABB
G	heavy	Homo.sapiens	Hu_IGHV4-59*11	93.2	Hu_IGHV4-59*11	53.8	H1	13	H1-13-4	13	TVSGDSMNNFYWG	BBBLBBABLBBBB
G	heavy	Homo.sapiens	Hu_IGHV4-59*11	93.2	Hu_IGHV4-59*11	88.9	H2	9	H2-9-1	13	YIYYSGTTN	BBBAALBBB
G	heavy	Homo.sapiens	Hu_IGHV4-59*11	93.2	Hu_IGHV4-59*11	100.0	H3	17	H3-17-*	-1	ARDSGdyvSYYYYGMDV
G	heavy	Homo.sapiens	Hu_IGHV4-59*11	93.2	Hu_IGHV4-59*11	87.5	H4	8	H4-8-1	9	IDTSKNQF	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	93.2	Hu_IGHV4-59*11	53.8	H1	13	H1-13-4	13	TVSGDSMNNFYWG	BBBLBBABLBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	93.2	Hu_IGHV4-59*11	88.9	H2	9	H2-9-1	13	YIYYSGTTN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	93.2	Hu_IGHV4-59*11	100.0	H3	17	H3-17-*	-1	ARDSGdyvSYYYYGMDV
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	93.2	Hu_IGHV4-59*11	87.5	H4	8	H4-8-1	9	IDTSKNQF	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV4-59*11	93.2	Hu_IGHV4-59*11	53.8	H1	13	H1-13-4	13	TVSGDSMNNFYWG	BBBLBBABLBBBB
I	heavy	Homo.sapiens	Hu_IGHV4-59*11	93.2	Hu_IGHV4-59*11	88.9	H2	9	H2-9-1	13	YIYYSGTTN	BBBAALBBB
I	heavy	Homo.sapiens	Hu_IGHV4-59*11	93.2	Hu_IGHV4-59*11	100.0	H3	17	H3-17-*	-1	ARDSGdyvSYYYYGMDV
I	heavy	Homo.sapiens	Hu_IGHV4-59*11	93.2	Hu_IGHV4-59*11	87.5	H4	8	H4-8-1	9	IDTSKNQF	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022