PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7U0E

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-58*02	82.2	Hu_IGHV1-58*02	61.5	H1	13	H1-13-*	-1	KASGFTSKNTALQ	BBBLBABABBBBB
A	heavy	Homo.sapiens	Hu_IGHV1-58*02	82.2	Hu_IGHV1-58*02	40.0	H2	10	H2-10-1	14	WIDISNYITN	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-58*02	82.2	Hu_IGHV1-58*02	100.0	H3	19	H3-19-*	-1	AAVGKDDdvltgGNKYFDH
A	heavy	Homo.sapiens	Hu_IGHV1-58*02	82.2	Hu_IGHV1-58*02	50.0	H4	8	H4-8-1	11	WDLSASMA	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV3-10*01	95.5	Hu_IGLV3-10*01	100.0	L1	11	L1-11-4	9	SGDALPKKYAY	BBAAAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-10*01	95.5	Hu_IGLV3-10*01	75.0	L2	8	L2-8-*	-1	HEDDKRPS	BLEABBBA
B	lambda	Homo.sapiens	Hu_IGLV3-10*01	95.5	Hu_IGLV3-10*01	66.7	L3	10	L3-10-1	20	YSTDTNDNHA	BBBBAALBBB
B	lambda	Homo.sapiens	Hu_IGLV3-10*01	95.5	Hu_IGLV3-10*01	83.3	L4	6	L4-6-2	9	SSGTTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-58*02	82.2	Hu_IGHV1-58*02	61.5	H1	13	H1-13-*	-1	KASGFTSKNTALQ	BBBLBABABBBBB
H	heavy	Homo.sapiens	Hu_IGHV1-58*02	82.2	Hu_IGHV1-58*02	40.0	H2	10	H2-10-1	14	WIDISNYITN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-58*02	82.2	Hu_IGHV1-58*02	100.0	H3	19	H3-19-*	-1	AAVGKDDdvltgGNKYFDH
H	heavy	Homo.sapiens	Hu_IGHV1-58*02	82.2	Hu_IGHV1-58*02	50.0	H4	8	H4-8-1	11	WDLSASMA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-10*01	95.5	Hu_IGLV3-10*01	100.0	L1	11	L1-11-4	9	SGDALPKKYAY	BBAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-10*01	95.5	Hu_IGLV3-10*01	75.0	L2	8	L2-8-*	-1	HEDDKRPS	BLEABBBA
L	lambda	Homo.sapiens	Hu_IGLV3-10*01	95.5	Hu_IGLV3-10*01	66.7	L3	10	L3-10-1	19	YSTDTNDNHA	BBBBAALBBB
L	lambda	Homo.sapiens	Hu_IGLV3-10*01	95.5	Hu_IGLV3-10*01	83.3	L4	6	L4-6-2	9	SSGTTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022