PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7TPR

#CDRs = 4; #Clusters = 6.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Camelus.dromedarius	Ca_IGHV1S62*01_VHH	86.1	Ca_IGHV1S62*01_VHH	84.6	H1	13	H1-13-1	18	AASGYTYSICTMG	BBBLBBAAABBBB
D	heavy	Camelus.dromedarius	Ca_IGHV1S62*01_VHH	86.1	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	GINADGSNTH	BBBAALAALB
D	heavy	Camelus.dromedarius	Ca_IGHV1S62*01_VHH	86.1	Ca_IGHV1S62*01_VHH	0.0	H3	21	H3-21-*	-1	AAHGTYDKYApcggfagTYTY
D	heavy	Camelus.dromedarius	Ca_IGHV1S62*01_VHH	86.1	Ca_IGHV1S62*01_VHH	75.0	H4	8	H4-8-1	14	RDNAKKTL	BBAAALBB
E	heavy	Camelus.dromedarius	Ca_IGHV1S62*01_VHH	86.1	Ca_IGHV1S62*01_VHH	84.6	H1	13	H1-13-1	20	AASGYTYSICTMG	BBBLBBAAABBBE
E	heavy	Camelus.dromedarius	Ca_IGHV1S62*01_VHH	86.1	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	GINADGSNTH	BBBAALAALB
E	heavy	Camelus.dromedarius	Ca_IGHV1S62*01_VHH	86.1	Ca_IGHV1S62*01_VHH	0.0	H3	21	H3-21-*	-1	AAHGTYDKYApcggfagTYTY
E	heavy	Camelus.dromedarius	Ca_IGHV1S62*01_VHH	86.1	Ca_IGHV1S62*01_VHH	75.0	H4	8	H4-8-1	10	RDNAKKTL	BBAAALBB
F	heavy	Camelus.dromedarius	Ca_IGHV1S50*01_VHH	93.2	Ca_IGHV1S50*01_VHH	61.5	H1	13	H1-13-*	-1	VVSGYTSSSRYMG	BBBLBAEEABBBB
F	heavy	Camelus.dromedarius	Ca_IGHV1S50*01_VHH	93.2	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	GIKRDGTNTY	BBBBLALBBB
F	heavy	Camelus.dromedarius	Ca_IGHV1S50*01_VHH	93.2	Ca_IGHV1S50*01_VHH	0.0	H3	15	H3-15-*	-1	AAGSWYNQwGYSMDY
F	heavy	Camelus.dromedarius	Ca_IGHV1S50*01_VHH	93.2	Ca_IGHV1S50*01_VHH	100.0	H4	8	H4-8-1	10	QDNAKNTV	BBAAALBB
G	heavy	Camelus.dromedarius	Ca_IGHV1S50*01_VHH	93.2	Ca_IGHV1S50*01_VHH	61.5	H1	13	H1-13-*	-1	VVSGYTSSSRYMG	BBBLBAEEBBBBB
G	heavy	Camelus.dromedarius	Ca_IGHV1S50*01_VHH	93.2	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	GIKRDGTNTY	BBBBLALBBB
G	heavy	Camelus.dromedarius	Ca_IGHV1S50*01_VHH	93.2	Ca_IGHV1S50*01_VHH	0.0	H3	15	H3-15-*	-1	AAGSWYNQwGYSMDY
G	heavy	Camelus.dromedarius	Ca_IGHV1S50*01_VHH	93.2	Ca_IGHV1S50*01_VHH	100.0	H4	8	H4-8-1	10	QDNAKNTV	BBAAALBB
H	heavy	Camelus.dromedarius	Ca_IGHV1S50*01_VHH	93.2	Ca_IGHV1S50*01_VHH	61.5	H1	13	H1-13-*	-1	VVSGYTSSSRYMG	BBBLBAEEABBBB
H	heavy	Camelus.dromedarius	Ca_IGHV1S50*01_VHH	93.2	CDRLenMismatch	-1.0	H2	10	H2-10-*	-1	GIKRDGTNTY	BBBBLALBBB
H	heavy	Camelus.dromedarius	Ca_IGHV1S50*01_VHH	93.2	Ca_IGHV1S50*01_VHH	0.0	H3	15	H3-15-*	-1	AAGSWYNQwGYSMDY
H	heavy	Camelus.dromedarius	Ca_IGHV1S50*01_VHH	93.2	Ca_IGHV1S50*01_VHH	100.0	H4	8	H4-8-1	10	QDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022