PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7TDN

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	61.5	H1	13	H1-13-*	-1	AASGFNFYSSSIH	BBBELAABAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	60.0	H2	10	H2-10-6	25	YISSYSGYTY	BBBABLLBBB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	100.0	H3	19	H3-19-*	-1	ARGYGYFDYnfsvgYALDY
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	37.5	H4	8	H4-8-1	24	ADTSKNTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	72.7	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBBBLABB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	75.0	L2	8	L2-8-*	-1	YSASSLYS	BLLABBAA
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	28.6	L3	11	L3-11-*	-1	QQSHpwYYPIT	BBBBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	83.3	L4	6	L4-6-*	-1	RSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022