PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7TCA

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV3-30*03	98.6	Hu_IGHV3-30*03	92.3	H1	13	H1-13-1	15	AASGFTLSSYGMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-30*03	98.6	Hu_IGHV3-30*03	100.0	H2	10	H2-10-2	9	VISYDGSNKY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-30*03	98.6	Hu_IGHV3-30*03	100.0	H3	19	H3-19-*	-1	ARGWAYwellpDYYYGMDV
D	heavy	Homo.sapiens	Hu_IGHV3-30*03	98.6	Hu_IGHV3-30*03	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
E	lambda	Homo.sapiens	Hu_IGLV8-61*01	100.0	Hu_IGLV8-61*01	85.7	L1	14	L1-14-1	14	GLSSGSVSTAYFpS	BBAAEBBBAAALBB
E	lambda	Homo.sapiens	Hu_IGLV8-61*01	100.0	Hu_IGLV8-61*01	87.5	L2	8	L2-8-1	19	YGTNTRSS	BLLABBBB
E	lambda	Homo.sapiens	Hu_IGLV8-61*01	100.0	Hu_IGLV8-61*01	87.5	L3	10	L3-10-*	-1	VLYMGRGIVV	BBBBBLLBBB
E	lambda	Homo.sapiens	Hu_IGLV8-61*01	100.0	Hu_IGLV8-61*01	100.0	L4	6	L4-6-2	16	ILGNKA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-30*03	98.6	Hu_IGHV3-30*03	92.3	H1	13	H1-13-1	14	AASGFTLSSYGMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*03	98.6	Hu_IGHV3-30*03	100.0	H2	10	H2-10-2	8	VISYDGSNKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*03	98.6	Hu_IGHV3-30*03	100.0	H3	19	H3-19-*	-1	ARGWAYwellpDYYYGMDV
H	heavy	Homo.sapiens	Hu_IGHV3-30*03	98.6	Hu_IGHV3-30*03	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV8-61*01	100.0	Hu_IGLV8-61*01	85.7	L1	14	L1-14-1	16	GLSSGSVSTAYFpS	BBAAEBBBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV8-61*01	100.0	Hu_IGLV8-61*01	87.5	L2	8	L2-8-1	19	YGTNTRSS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV8-61*01	100.0	Hu_IGLV8-61*01	87.5	L3	10	L3-10-*	-1	VLYMGRGIVV	BBBBBLLBBB
L	lambda	Homo.sapiens	Hu_IGLV8-61*01	100.0	Hu_IGLV8-61*01	100.0	L4	6	L4-6-2	17	ILGNKA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022