PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7T9N

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	90.4	Hu_IGHV5-10-1*01	76.9	H1	13	H1-13-1	11	RGSGYRFTSYWIN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	90.4	Hu_IGHV5-10-1*01	90.0	H2	10	H2-10-1	14	RIDPTDSYTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	90.4	Hu_IGHV5-10-1*01	100.0	H3	14	H3-14-*	-1	ARLEPGYSSTWSVN	BBBBBEAABABBAB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	90.4	Hu_IGHV5-10-1*01	87.5	H4	8	H4-8-1	14	ADKSINTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	95.5	Hu_IGLV1-36*01	92.3	L1	13	L1-13-*	-1	SGNSSNIGNNAVN	BBBABEAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	95.5	Hu_IGLV1-36*01	87.5	L2	8	L2-8-*	-1	YYDDQLPS	BLLLBBBB
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	95.5	Hu_IGLV1-36*01	55.6	L3	11	L3-11-1	10	TSWDDSLDSQL	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV1-36*01	95.5	Hu_IGLV1-36*01	83.3	L4	6	L4-6-2	12	RSGTSA	BBEABB
N	heavy	Homo.sapiens	Hu_IGHV3-48*03	90.4	Hu_IGHV3-48*03	84.6	H1	13	H1-13-1	10	AASGFTFSNYKMN	BBBLBBAAABBBB
N	heavy	Homo.sapiens	Hu_IGHV3-48*03	90.4	Hu_IGHV3-48*03	50.0	H2	10	H2-10-2	14	DISQSGASIS	BBBAALABBB
N	heavy	Homo.sapiens	Hu_IGHV3-48*03	90.4	Hu_IGHV3-48*03	100.0	H3	21	H3-21-*	-1	ARcpapftrDCFDVTSTTYAY
N	heavy	Homo.sapiens	Hu_IGHV3-48*03	90.4	Hu_IGHV3-48*03	87.5	H4	8	H4-8-1	10	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022