PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7SOE

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV2-5*01	98.6	Hu_IGHV2-5*01	66.7	H1	15	H1-15-1	7	KLSGFSVNTggVGVG	BBBLBBAABBLBBBB
B	heavy	Homo.sapiens	Hu_IGHV2-5*01	98.6	Hu_IGHV2-5*01	88.9	H2	9	H2-9-1	12	LIYWNDDKL	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV2-5*01	98.6	Hu_IGHV2-5*01	66.7	H3	17	H3-17-*	-1	AHVLVwfgEVLPDAFDV
B	heavy	Homo.sapiens	Hu_IGHV2-5*01	98.6	Hu_IGHV2-5*01	100.0	H4	8	H4-8-1	13	KDTSKNQV	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	72.7	L1	11	L1-11-4	21	SGDKLGETYAS	BBAAAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	87.5	L2	8	L2-8-1	10	YQDNKRPS	BLEABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	62.5	L3	9	L3-9-1	23	QAWDKTIAG	BBBBLLBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	83.3	L4	6	L4-6-*	-1	NSENTA	BBLLBB
E	heavy	Homo.sapiens	Hu_IGHV2-5*01	98.6	Hu_IGHV2-5*01	66.7	H1	15	H1-15-1	7	KLSGFSVNTggVGVG	BBBLBBAABBLBBBB
E	heavy	Homo.sapiens	Hu_IGHV2-5*01	98.6	Hu_IGHV2-5*01	88.9	H2	9	H2-9-1	12	LIYWNDDKL	BBBAALBBB
E	heavy	Homo.sapiens	Hu_IGHV2-5*01	98.6	Hu_IGHV2-5*01	66.7	H3	17	H3-17-*	-1	AHVLVwfgEVLPDAFDV
E	heavy	Homo.sapiens	Hu_IGHV2-5*01	98.6	Hu_IGHV2-5*01	100.0	H4	8	H4-8-1	13	KDTSKNQV	BBAAALBB
G	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	72.7	L1	11	L1-11-4	21	SGDKLGETYAS	BBAAAAABBBB
G	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	87.5	L2	8	L2-8-1	10	YQDNKRPS	BLEABBBB
G	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	62.5	L3	9	L3-9-1	23	QAWDKTIAG	BBBBLLBBB
G	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	83.3	L4	6	L4-6-*	-1	NSENTA	BBLLBB
H	heavy	Homo.sapiens	Hu_IGHV2-5*01	98.6	Hu_IGHV2-5*01	66.7	H1	15	H1-15-1	7	KLSGFSVNTggVGVG	BBBLBBAABBLBBBB
H	heavy	Homo.sapiens	Hu_IGHV2-5*01	98.6	Hu_IGHV2-5*01	88.9	H2	9	H2-9-1	12	LIYWNDDKL	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV2-5*01	98.6	Hu_IGHV2-5*01	66.7	H3	17	H3-17-*	-1	AHVLVwfgEVLPDAFDV
H	heavy	Homo.sapiens	Hu_IGHV2-5*01	98.6	Hu_IGHV2-5*01	100.0	H4	8	H4-8-1	13	KDTSKNQV	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	72.7	L1	11	L1-11-4	21	SGDKLGETYAS	BBAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	87.5	L2	8	L2-8-1	10	YQDNKRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	62.5	L3	9	L3-9-1	23	QAWDKTIAG	BBBBLLBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	95.5	Hu_IGLV3-1*01	83.3	L4	6	L4-6-*	-1	NSENTA	BBLLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022