PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7SOB

#CDRs = 8; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	9	QASQDIRFYLN	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	75.0	L2	8	L2-8-1	8	SDASNMET	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L3	9	L3-9-cis7-1	8	QQYDNlPFT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-30*02	97.3	Hu_IGHV3-30*02	92.3	H1	13	H1-13-1	10	AASGFTFNSYGMH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-30*02	97.3	Hu_IGHV3-30*02	90.0	H2	10	H2-10-2	19	FIRYDGGNKY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-30*02	97.3	Hu_IGHV3-30*02	50.0	H3	15	H3-15-*	-1	ANLKDSrYSGSYYDY
C	heavy	Homo.sapiens	Hu_IGHV3-30*02	97.3	Hu_IGHV3-30*02	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	9	QASQDIRFYLN	BBABBAEABBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	75.0	L2	8	L2-8-1	8	SDASNMET	BLEABBBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L3	9	L3-9-cis7-1	8	QQYDNlPFT	BBAABBbBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
F	heavy	Homo.sapiens	Hu_IGHV3-30*02	97.3	Hu_IGHV3-30*02	92.3	H1	13	H1-13-1	10	AASGFTFNSYGMH	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-30*02	97.3	Hu_IGHV3-30*02	90.0	H2	10	H2-10-2	19	FIRYDGGNKY	BBBAALABBB
F	heavy	Homo.sapiens	Hu_IGHV3-30*02	97.3	Hu_IGHV3-30*02	50.0	H3	15	H3-15-*	-1	ANLKDSrYSGSYYDY
F	heavy	Homo.sapiens	Hu_IGHV3-30*02	97.3	Hu_IGHV3-30*02	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
G	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.4	Hu_IGHV1-18*01	92.3	H1	13	H1-13-1	10	KASGYPFTSYGIS	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.4	Hu_IGHV1-18*01	90.0	H2	10	H2-10-1	10	WISTYNGNTN	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.4	Hu_IGHV1-18*01	100.0	H3	20	H3-20-*	-1	ARDYTRGAWfgesliGGFDN
G	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.4	Hu_IGHV1-18*01	75.0	H4	8	H4-8-1	12	TDTSTTTG	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.4	Hu_IGHV1-18*01	92.3	H1	13	H1-13-1	10	KASGYPFTSYGIS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.4	Hu_IGHV1-18*01	90.0	H2	10	H2-10-1	10	WISTYNGNTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.4	Hu_IGHV1-18*01	100.0	H3	20	H3-20-*	-1	ARDYTRGAWfgesliGGFDN
H	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.4	Hu_IGHV1-18*01	75.0	H4	8	H4-8-1	12	TDTSTTTG	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.0	Hu_IGKV3-20*02	75.0	L1	12	L1-12-1	9	RASQTVSStSLA	BBABBBBAAABB
I	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.0	Hu_IGKV3-20*02	100.0	L2	8	L2-8-1	7	YGASSRAT	BLEABBBB
I	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.0	Hu_IGKV3-20*02	100.0	L3	8	L3-8-1	14	QQHDTSLT	BBAABEBB
I	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.0	Hu_IGKV3-20*02	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB
J	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.0	Hu_IGKV3-20*02	75.0	L1	12	L1-12-1	9	RASQTVSStSLA	BBABBBBAAABB
J	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.0	Hu_IGKV3-20*02	100.0	L2	8	L2-8-1	7	YGASSRAT	BLEABBBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.0	Hu_IGKV3-20*02	100.0	L3	8	L3-8-1	14	QQHDTSLT	BBAABEBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.0	Hu_IGKV3-20*02	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	81.8	L1	11	L1-11-1	9	QASQDIRFYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	75.0	L2	8	L2-8-1	8	SDASNMET	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L3	9	L3-9-cis7-1	8	QQYDNlPFT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	98.5	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
M	heavy	Homo.sapiens	Hu_IGHV3-30*02	97.3	Hu_IGHV3-30*02	92.3	H1	13	H1-13-1	10	AASGFTFNSYGMH	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-30*02	97.3	Hu_IGHV3-30*02	90.0	H2	10	H2-10-2	19	FIRYDGGNKY	BBBAALABBB
M	heavy	Homo.sapiens	Hu_IGHV3-30*02	97.3	Hu_IGHV3-30*02	50.0	H3	15	H3-15-*	-1	ANLKDSrYSGSYYDY
M	heavy	Homo.sapiens	Hu_IGHV3-30*02	97.3	Hu_IGHV3-30*02	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
N	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.4	Hu_IGHV1-18*01	92.3	H1	13	H1-13-1	10	KASGYPFTSYGIS	BBBLBBAAABBBB
N	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.4	Hu_IGHV1-18*01	90.0	H2	10	H2-10-1	10	WISTYNGNTN	BBBAAALBBB
N	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.4	Hu_IGHV1-18*01	100.0	H3	20	H3-20-*	-1	ARDYTRGAWfgesliGGFDN
N	heavy	Homo.sapiens	Hu_IGHV1-18*01	94.4	Hu_IGHV1-18*01	75.0	H4	8	H4-8-1	12	TDTSTTTG	BBAAALBB
O	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.0	Hu_IGKV3-20*02	75.0	L1	12	L1-12-1	9	RASQTVSStSLA	BBABBBBAAABB
O	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.0	Hu_IGKV3-20*02	100.0	L2	8	L2-8-1	7	YGASSRAT	BLEABBBB
O	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.0	Hu_IGKV3-20*02	100.0	L3	8	L3-8-1	14	QQHDTSLT	BBAABEBB
O	kappa	Homo.sapiens	Hu_IGKV3-20*02	97.0	Hu_IGKV3-20*02	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022