PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7SN3

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H1	13	H1-13-1	9	AASGFTFSSYGMH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	80.0	H2	10	H2-10-2	12	VIWYDGTNTY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H3	16	H3-16-*	-1	ARDLAYRDYvwRYFDL
D	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	12	RDNSKNTL	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	90.9	L1	11	L1-11-1	13	RASQSVSTYLA	BBABBAEABBB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	18	YDASNRAT	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	85.7	L3	11	L3-11-*	-1	QCRSNWPpgIT	BBBBABbBBBB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H1	13	H1-13-1	9	AASGFTFSSYGMH	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	80.0	H2	10	H2-10-2	12	VIWYDGTNTY	BBBAALABBB
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H3	16	H3-16-*	-1	ARDLAYRDYvwRYFDL
F	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	12	RDNSKNTL	BBAAALBB
G	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	90.9	L1	11	L1-11-1	15	RASQSVSTYLA	BBABBAEABBB
G	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	18	YDASNRAT	BLLABBBB
G	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	85.7	L3	11	L3-11-*	-1	QCRSNWPpgIT	BBBBABbBBBB
G	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H1	13	H1-13-1	9	AASGFTFSSYGMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	80.0	H2	10	H2-10-2	12	VIWYDGTNTY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H3	16	H3-16-*	-1	ARDLAYRDYvwRYFDL
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	100.0	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	13	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	90.9	L1	11	L1-11-1	20	RASQSVSTYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	19	YDASNRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	85.7	L3	11	L3-11-*	-1	QCRSNWPpgIT	BBBBABBBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022