PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7SFX

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	66.7	H1	15	H1-15-*	-1	AISGDSISSdtTAWS	BBAABBAABABBEBB
A	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	72.7	H2	11	H2-11-*	-1	WTYYRSKwFNY	BBABAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	100.0	H3	11	H3-11-*	-1	ARGNGNGGMDV	BBBBAAEEELB
A	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	100.0	H4	8	H4-8-1	20	PDTSKNQF	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	100.0	L1	11	L1-11-4	14	SGDALPKQYAY	BBAAAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	87.5	L2	8	L2-8-*	-1	FKDSERPS	BLLABBBA
B	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	66.7	L3	11	L3-11-*	-1	QSVDNSGFYQV	BBBBBLBABBB
B	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	100.0	L4	6	L4-6-*	-1	SSGTTV	ALEABB
C	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	66.7	H1	15	H1-15-*	-1	AISGDSISSdtTAWS	BBBLBBAABAALALB
C	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	72.7	H2	11	H2-11-*	-1	WTYYRSKwFNY	BBABAABBBBB
C	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	100.0	H3	11	H3-11-*	-1	ARGNGNGGMDV	BBBAELLEAAB
C	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	100.0	H4	8	H4-8-1	19	PDTSKNQF	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	100.0	L1	11	L1-11-*	-1	SGDALPKQYAY	BBAAAABLEBB
D	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	87.5	L2	8	L2-8-1	13	FKDSERPS	BLLABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	66.7	L3	11	L3-11-*	-1	QSVDNSGFYQV	BBBBBLLABBB
D	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	100.0	L4	6	L4-6-*	-1	SSGTTV	ALEABB
G	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	66.7	H1	15	H1-15-*	-1	AISGDSISSdtTAWS	BBBLBBAALEBAEBB
G	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	72.7	H2	11	H2-11-*	-1	WTYYRSKwFNY	BBABAABBBBB
G	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	100.0	H3	11	H3-11-*	-1	ARGNGNGGMDV	BBBLBLLBBBB
G	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	100.0	H4	8	H4-8-1	20	PDTSKNQF	BBAAALBB
H	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	100.0	L1	11	L1-11-*	-1	SGDALPKQYAY	BEAELBBAEBB
H	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	87.5	L2	8	L2-8-1	19	FKDSERPS	BLLABBBB
H	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	66.7	L3	11	L3-11-*	-1	QSVDNSGFYQV	BBBBBLELBBB
H	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	100.0	L4	6	L4-6-*	-1	SSGTTV	ALEABB
J	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	66.7	H1	15	H1-15-*	-1	AISgDSISSdtTAWS
J	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	72.7	H2	11	H2-11-*	-1	WTYYRSKwFNY	BBBBAAALBBB
J	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	100.0	H3	11	H3-11-*	-1	ARgngnggmDV
J	heavy	Homo.sapiens	Hu_IGHV6-1*01	93.2	Hu_IGHV6-1*01	100.0	H4	8	H4-8-*	-1	PDTSKNQF	BBAABBBB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	100.0	L1	11	L1-11-*	-1	sgDALPKQYAY
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	87.5	L2	8	L2-8-*	-1	FKDSERPS	BLEBBBBB
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	66.7	L3	11	L3-11-*	-1	QsVDNSGFYQV
K	lambda	Homo.sapiens	Hu_IGLV3-25*02	92.5	Hu_IGLV3-25*02	100.0	L4	6	L4-6-*	-1	sSGTTV

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022