PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7SD5

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	86.7	H1	15	H1-15-2	10	TVSGGSISssNFYWG	BBBLEBAABAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	66.7	H2	9	H2-9-1	16	SITYSGRTF	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	100.0	H3	22	H3-22-*	-1	ARTfpsyydrsGYHYLNYGMDV
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	100.0	H4	8	H4-8-1	10	VDTSKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	100.0	L1	13	L1-13-2	6	TRSSGSIASNYVQ	BBABEBAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	100.0	L2	8	L2-8-1	8	YEDNQRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	85.7	L3	9	L3-9-3	28	QSYDSSSWV	BBBBAABBB
L	lambda	Homo.sapiens	Hu_IGLV6-57*01	98.6	Hu_IGLV6-57*01	100.0	L4	8	L4-8-1	6	idSSSNSA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022