PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7S6K

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV1-69*08	100.0	Hu_IGHV1-69*08	100.0	H1	13	H1-13-3	15	KASGGTFSSYTIS	BBBEBAAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*08	100.0	Hu_IGHV1-69*08	60.0	H2	10	H2-10-1	18	RIIPILDRVM	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*08	100.0	Hu_IGHV1-69*08	100.0	H3	18	H3-18-*	-1	ARRAidsdTYVEQSHFDY
C	heavy	Homo.sapiens	Hu_IGHV1-69*08	100.0	Hu_IGHV1-69*08	100.0	H4	8	H4-8-*	-1	ADKSTSTA	BBABLBBB
D	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L1	11	L1-11-1	8	RASQSVSSYLA	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	15	YDASNRAT	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	0.0	L3	5	L3-5-1	41	QQPLT	BBAAB
D	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
F	heavy	Homo.sapiens	Hu_IGHV1-69*08	100.0	Hu_IGHV1-69*08	100.0	H1	13	H1-13-3	15	KASGGTFSSYTIS	BBBEBAAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV1-69*08	100.0	Hu_IGHV1-69*08	60.0	H2	10	H2-10-1	18	RIIPILDRVM	BBBAAALBBB
F	heavy	Homo.sapiens	Hu_IGHV1-69*08	100.0	Hu_IGHV1-69*08	100.0	H3	18	H3-18-*	-1	ARRAidsdTYVEQSHFDY
F	heavy	Homo.sapiens	Hu_IGHV1-69*08	100.0	Hu_IGHV1-69*08	100.0	H4	8	H4-8-*	-1	ADKSTSTA	BBABLBBB
G	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L1	11	L1-11-1	8	RASQSVSSYLA	BBABBAEABBB
G	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	15	YDASNRAT	BLLABBBB
G	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	0.0	L3	5	L3-5-1	41	QQPLT	BBAAB
G	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*08	100.0	Hu_IGHV1-69*08	100.0	H1	13	H1-13-3	15	KASGGTFSSYTIS	BBBEBAAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*08	100.0	Hu_IGHV1-69*08	60.0	H2	10	H2-10-1	18	RIIPILDRVM	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*08	100.0	Hu_IGHV1-69*08	100.0	H3	18	H3-18-*	-1	ARRAidsdTYVEQSHFDY
H	heavy	Homo.sapiens	Hu_IGHV1-69*08	100.0	Hu_IGHV1-69*08	100.0	H4	8	H4-8-*	-1	ADKSTSTA	BBABLBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L1	11	L1-11-1	8	RASQSVSSYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L2	8	L2-8-1	15	YDASNRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	0.0	L3	5	L3-5-1	41	QQPLT	BBAAB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	97.1	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022