PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7S0X

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-21*05	94.5	Hu_IGHV3-21*05	76.9	H1	13	H1-13-1	11	AASGFSFSEYRMN	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-21*05	94.5	Hu_IGHV3-21*05	60.0	H2	10	H2-10-2	12	FISSSGTYID	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-21*05	94.5	Hu_IGHV3-21*05	100.0	H3	13	H3-13-*	-1	ARGMGIAVRRFDY	BBBBEAABBBBAB
C	heavy	Homo.sapiens	Hu_IGHV3-21*05	94.5	Hu_IGHV3-21*05	75.0	H4	8	H4-8-1	14	RDNVNNSL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	90.9	L1	11	L1-11-4	23	GGNNIGSESVH	BBABAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	75.0	L2	8	L2-8-1	7	YDDAVRPS	BLLABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	66.7	L3	10	L3-10-*	-1	QVWDSSTVAS	BBBBAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	83.3	L4	6	L4-6-2	21	NSRNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-21*05	94.5	Hu_IGHV3-21*05	76.9	H1	13	H1-13-1	16	AASGFSFSEYRMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*05	94.5	Hu_IGHV3-21*05	60.0	H2	10	H2-10-2	11	FISSSGTYID	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*05	94.5	Hu_IGHV3-21*05	100.0	H3	13	H3-13-*	-1	ARGMGIAVRRFDY	BBBBEAABBBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-21*05	94.5	Hu_IGHV3-21*05	75.0	H4	8	H4-8-1	10	RDNVNNSL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	90.9	L1	11	L1-11-3	8	GGNNIGSESVH	BEBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	75.0	L2	8	L2-8-1	12	YDDAVRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	66.7	L3	10	L3-10-*	-1	QVWDSSTVAS	BBBBAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	83.3	L4	6	L4-6-*	-1	NSRNTA	BAAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022