PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7S0D

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	92.3	H1	13	H1-13-*	-1	AASGFTFSSYAMT	BBBLBBBEABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	80.0	H2	10	H2-10-*	-1	YISGSGGGTY	BBBLBAABBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	50.0	H3	14	H3-14-*	-1	ARDRWASGWLAFDV	BBBLALBLEBBBAA
H	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBBEALBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L1	11	L1-11-*	-1	QASQDISNYLN	BBABLAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	18	YDASNLET	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	42.9	L3	9	L3-9-*	-1	QQaYAYPLT	BBBAAEAAB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB
M	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	92.3	H1	13	H1-13-*	-1	AASGFTFSSYAMT	BBBLBBBEABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	80.0	H2	10	H2-10-*	-1	YISGSGGGTY	BBBLBAABBB
M	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	50.0	H3	14	H3-14-*	-1	ARDRWASGWLAFDV	BBBLALBLEBBBAA
M	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBBEALBB
N	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L1	11	L1-11-*	-1	QASQDISNYLN	BBABLAEABBB
N	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	18	YDASNLET	BLLABBBB
N	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	42.9	L3	9	L3-9-*	-1	QQaYAYPLT	BBBAAEAAB
N	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB
O	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	92.3	H1	13	H1-13-*	-1	AASGFTFSSYAMT	BBBLBBBEABBBB
O	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	80.0	H2	10	H2-10-*	-1	YISGSGGGTY	BBBLBAABBB
O	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	50.0	H3	14	H3-14-*	-1	ARDRWASGWLAFDV	BBBLALBLEBBBAA
O	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H4	8	H4-8-*	-1	RDNSKNTL	BBBEALBB
P	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L1	11	L1-11-*	-1	QASQDISNYLN	BBABLAEABBB
P	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	18	YDASNLET	BLLABBBB
P	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	42.9	L3	9	L3-9-*	-1	QQaYAYPLT	BBBAAEAAB
P	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022