PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7S0B

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H1	13	H1-13-1	10	AASGFTFSSYAMS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	90.0	H2	10	H2-10-2	9	LISGSGGSTY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	50.0	H3	14	H3-14-*	-1	ARDLWGSGFFAFDV	BBBAALAELBBBAB
A	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	13	QASQDISNYLN	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-4	9	YDASNLET	BEAABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	42.9	L3	9	L3-9-cis7-1	10	QQDaGTPLT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H1	13	H1-13-1	10	AASGFTFSSYAMS	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	90.0	H2	10	H2-10-2	9	LISGSGGSTY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	50.0	H3	14	H3-14-*	-1	ARDLWGSGFFAFDV	BBBAALAELBBBAB
C	heavy	Homo.sapiens	Hu_IGHV3-23*04	100.0	Hu_IGHV3-23*04	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	13	QASQDISNYLN	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-4	9	YDASNLET	BEAABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	42.9	L3	9	L3-9-cis7-1	9	QQDaGTPLT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022