PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RXL

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	92.3	H1	13	H1-13-1	8	AASGFTFSSYTMN	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	90.0	H2	10	H2-10-2	9	SISSSSTYIY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H3	14	H3-14-*	-1	ARRAGGFDAYYFDY	BBBBEBLLBBBBAB
C	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	6	RDNAKNSL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	90.9	L1	11	L1-11-3	9	SGDKLGDKFAC	BBBLAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	87.5	L2	8	L2-8-1	11	YQDTKRPS	BLEABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	87.5	L3	9	L3-9-4	22	QAWDSSTVV	BBBBEABBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	19	NSGNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	92.3	H1	13	H1-13-1	8	AASGFTFSSYTMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	90.0	H2	10	H2-10-2	9	SISSSSTYIY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H3	14	H3-14-*	-1	ARRAGGFDAYYFDY	BBBBEBLLBBBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	10	RDNAKNSL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	90.9	L1	11	L1-11-3	12	SGDKLGDKFAC	BBBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	87.5	L2	8	L2-8-*	-1	YQDTKRPS	BLEABBBA
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	87.5	L3	9	L3-9-1	20	QAWDSSTVV	BBBBLLBBB
L	lambda	Homo.sapiens	Hu_IGLV3-1*01	100.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	20	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022