PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RTH

#CDRs = 8; #Clusters = 13.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	72.7	L1	11	L1-11-*	-1	RasqsvSSAVA
A	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	75.0	L2	8	L2-8-1	7	YSASSLYS	BLEABBBB
A	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	28.6	L3	9	L3-9-3	17	QQSSSSLIT	BBBBAABBB
A	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	83.3	L4	6	L4-6-2	21	RSGTDF	BBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	13	AASGFNFSYYSIH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	70.0	H2	10	H2-10-*	-1	YISSsSSYTS
B	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	100.0	H3	21	H3-21-*	-1	ARGYQYWQYHAswywnggLDY
B	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	37.5	H4	8	H4-8-1	6	ADTSKNTA	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	72.7	L1	11	L1-11-*	-1	RasqsvSSAVA
C	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	75.0	L2	8	L2-8-1	4	YSASSLYS	BLEABBBB
C	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	28.6	L3	9	L3-9-*	-1	QQSSSSLIT	BBBBBLBBB
C	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	83.3	L4	6	L4-6-2	21	RSGTDF	BBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	12	AASGFNFSYYSIH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	70.0	H2	10	H2-10-*	-1	YISSssSYTS
D	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	100.0	H3	21	H3-21-*	-1	ARGYQYWQYHAswywnggLDY
D	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	37.5	H4	8	H4-8-1	5	ADTSKNTA	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	72.7	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABABBBBBB
E	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	75.0	L2	8	L2-8-1	4	YSASSLYS	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	28.6	L3	9	L3-9-*	-1	QQSSSSLIT	BBBBAABBB
E	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	83.3	L4	6	L4-6-2	21	RSGTDF	BBEABB
F	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	14	AASGFNFSYYSIH	BBBLBBAAABBBB
F	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	70.0	H2	10	H2-10-*	-1	YISSssSYTS
F	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	100.0	H3	21	H3-21-*	-1	ARGYQYWQYHAswywnggLDY
F	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	37.5	H4	8	H4-8-1	5	ADTSKNTA	BBAAALBB
G	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	72.7	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABABBBBBB
G	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	75.0	L2	8	L2-8-1	8	YSASSLYS	BLLABBBB
G	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	28.6	L3	9	L3-9-3	17	QQSSSSLIT	BBBBAABBB
G	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	83.3	L4	6	L4-6-2	19	RSGTDF	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	15	AASGFNFSYYSIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	70.0	H2	10	H2-10-*	-1	YISSsSSYTS
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	100.0	H3	21	H3-21-*	-1	ARGYQYWQYHAswywnggLDY
H	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	37.5	H4	8	H4-8-1	4	ADTSKNTA	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	72.7	L1	11	L1-11-*	-1	RasqsvsSAVA
I	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	75.0	L2	8	L2-8-1	5	YSASSLYS	BLLABBBB
I	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	28.6	L3	9	L3-9-3	20	QQSSSSLIT	BBBBAABBB
I	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	83.3	L4	6	L4-6-2	28	RSGTDF	BBEABB
J	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	15	AASGFNFSYYSIH	BBBLBBAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	70.0	H2	10	H2-10-*	-1	YISSSSSYTS	BBBEAALBBB
J	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	100.0	H3	21	H3-21-*	-1	ARGYQYWQYHAswywnggLDY
J	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	37.5	H4	8	H4-8-1	3	ADTSKNTA	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	72.7	L1	11	L1-11-*	-1	RasQSVSSAVA
K	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	75.0	L2	8	L2-8-1	8	YSASSLYS	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	28.6	L3	9	L3-9-*	-1	QQSSSSLIT	BBBBBLBBB
K	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	83.3	L4	6	L4-6-2	24	RSGTDF	BBEABB
L	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	14	AASGFNFSYYSIH	BBBLBBAAABBBB
L	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	70.0	H2	10	H2-10-*	-1	YISSssSYTS
L	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	100.0	H3	21	H3-21-*	-1	ARGYQYWQYHAswywnggLDY
L	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	37.5	H4	8	H4-8-1	6	ADTSKNTA	BBAAALBB
M	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	72.7	L1	11	L1-11-*	-1	RASQSVSSAVA	BBBBEBBBBBB
M	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	75.0	L2	8	L2-8-1	5	YSASSLYS	BLLABBBB
M	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	28.6	L3	9	L3-9-3	20	QQSSSSLIT	BBBBAABBB
M	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	83.3	L4	6	L4-6-2	24	RSGTDF	BBEABB
N	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	14	AASGFNFSYYSIH	BBBLBBAAABBBB
N	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	70.0	H2	10	H2-10-*	-1	YISSSSSYTS	BBAEAALBBB
N	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	100.0	H3	21	H3-21-*	-1	ARGYQYWQYHAswywnggLDY
N	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	37.5	H4	8	H4-8-1	5	ADTSKNTA	BBAAALBB
O	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	72.7	L1	11	L1-11-*	-1	rasqsVSSAVA
O	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	75.0	L2	8	L2-8-1	5	YSASSLYS	BLLABBBB
O	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	28.6	L3	9	L3-9-3	20	QQSSSSLIT	BBBBAABBB
O	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	83.3	L4	6	L4-6-2	23	RSGTDF	BBEABB
P	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	14	AASGFNFSYYSIH	BBBLBBAAABBBB
P	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	70.0	H2	10	H2-10-*	-1	YIsssssYTS
P	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	100.0	H3	21	H3-21-*	-1	ARGYQYWQYHAswywnggLDY
P	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	37.5	H4	8	H4-8-1	6	ADTSKNTA	BBAAALBB
Q	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	72.7	L1	11	L1-11-*	-1	RasqsvsSAVA
Q	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	75.0	L2	8	L2-8-1	8	YSASSLYS	BLLABBBB
Q	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	28.6	L3	9	L3-9-3	22	QQSSSSLIT	BBBBAABBB
Q	kappa	Homo.sapiens	Hu_IGKV1D-13*01	97.1	Hu_IGKV1D-13*01	83.3	L4	6	L4-6-2	26	RSGTDF	BBEABB
R	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	69.2	H1	13	H1-13-1	16	AASGFNFSYYSIH	BBBLBBAAABBBB
R	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	70.0	H2	10	H2-10-*	-1	YISssssYTS
R	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	100.0	H3	21	H3-21-*	-1	ARGYQYWQYHAswywnggLDY
R	heavy	Homo.sapiens	Hu_IGHV3-48*01	91.8	Hu_IGHV3-48*01	37.5	H4	8	H4-8-1	6	ADTSKNTA	BBAAALBB
a	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	61.5	H1	13	H1-13-5	15	AASGSTDSIEYMT	BBBEBAAABABBB
a	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	CDRLenMismatch	-1.0	H2	10	H2-10-1	13	ALYTHTGNTY	BBBAAALBBB
a	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	0.0	H3	20	H3-20-*	-1	GATRKYVpvrfalDQSSYDY
a	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	11	RDKAKNMV	BBAAALBB
c	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	61.5	H1	13	H1-13-*	-1	AASGSTDSIEYMT	BBABBAAABABBB
c	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	CDRLenMismatch	-1.0	H2	10	H2-10-1	13	ALYTHTGNTY	BBBAAALBBB
c	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	0.0	H3	20	H3-20-*	-1	GATRKYVpvrfalDQSSYDY
c	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	9	RDKAKNMV	BBAAALBB
e	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	61.5	H1	13	H1-13-5	19	AASGSTDSIEYMT	BBBEBAAABABBB
e	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	CDRLenMismatch	-1.0	H2	10	H2-10-1	13	ALYTHTGNTY	BBBAAALBBB
e	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	0.0	H3	20	H3-20-*	-1	GATRKYVpvrfalDQSSYDY
e	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	11	RDKAKNMV	BBAAALBB
g	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	61.5	H1	13	H1-13-*	-1	AASgsTDSIEYMT
g	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	CDRLenMismatch	-1.0	H2	10	H2-10-1	14	ALYTHTGNTY	BBBAAALBBB
g	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	0.0	H3	20	H3-20-*	-1	GATRKYVpvrfalDQSSYDY
g	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	8	RDKAKNMV	BBAAALBB
i	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	61.5	H1	13	H1-13-5	16	AASGSTDSIEYMT	BBBEBAAABABBB
i	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	CDRLenMismatch	-1.0	H2	10	H2-10-1	14	ALYTHTGNTY	BBBAAALBBB
i	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	0.0	H3	20	H3-20-*	-1	GATRKYVpvrfalDQSSYDY
i	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	10	RDKAKNMV	BBAAALBB
k	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	61.5	H1	13	H1-13-5	16	AASGSTDSIEYMT	BBBEBAAABABBB
k	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	CDRLenMismatch	-1.0	H2	10	H2-10-1	14	ALYTHTGNTY	BBBAAALBBB
k	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	0.0	H3	20	H3-20-*	-1	GATRKYVpvrfalDQSSYDY
k	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	8	RDKAKNMV	BBAAALBB
m	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	61.5	H1	13	H1-13-*	-1	AAsgstDSIEYMT
m	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	CDRLenMismatch	-1.0	H2	10	H2-10-1	14	ALYTHTGNTY	BBBAAALBBB
m	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	0.0	H3	20	H3-20-*	-1	GATRKYVpvrfalDQSSYDY
m	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	9	RDKAKNMV	BBAAALBB
o	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	61.5	H1	13	H1-13-*	-1	AAsgSTDSIEYMT
o	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	CDRLenMismatch	-1.0	H2	10	H2-10-1	18	ALYTHTGNTY	BBBAAALBBB
o	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	0.0	H3	20	H3-20-*	-1	GATRKYVpvrfalDQSSYDY
o	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	13	RDKAKNMV	BBAAALBB
q	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	61.5	H1	13	H1-13-5	16	AASGSTDSIEYMT	BBBEBAAABABBB
q	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	CDRLenMismatch	-1.0	H2	10	H2-10-1	15	ALYTHTGNTY	BBBAAALBBB
q	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	0.0	H3	20	H3-20-*	-1	GATRKYVpvrfalDQSSYDY
q	heavy	Homo.sapiens	Hu_IGHV3-66*01	83.1	Hu_IGHV3-66*01	50.0	H4	8	H4-8-1	8	RDKAKNMV	BBAAALBB

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