PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RSN

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV1-3*04	63.5	None	-1.0	H1	14	H1-14-*	-1	WTSEDIFERTeLIH	BBBAAAAAABABBB
E	heavy	Homo.sapiens	Hu_IGHV1-3*04	63.5	None	-1.0	H2	10	H2-10-*	-1	WVKTVTGAVN
E	heavy	Homo.sapiens	Hu_IGHV1-3*04	63.5	Hu_IGHV1-3*04	100.0	H3	16	H3-16-*	-1	ARQKFYTggQGWYFDL
E	heavy	Homo.sapiens	Hu_IGHV1-3*04	63.5	Hu_IGHV1-3*04	50.0	H4	8	H4-8-1	15	RDRDLFTA	BBAAALBB
F	heavy	Homo.sapiens	Hu_IGHV1-3*04	63.5	None	-1.0	H1	14	H1-14-*	-1	WTSEDIFERTeLIH	BBBAAAAAABABBB
F	heavy	Homo.sapiens	Hu_IGHV1-3*04	63.5	None	-1.0	H2	10	H2-10-*	-1	WVKTVTGAVN
F	heavy	Homo.sapiens	Hu_IGHV1-3*04	63.5	Hu_IGHV1-3*04	100.0	H3	16	H3-16-*	-1	ARQKFYTggQGWYFDL
F	heavy	Homo.sapiens	Hu_IGHV1-3*04	63.5	Hu_IGHV1-3*04	50.0	H4	8	H4-8-1	15	RDRDLFTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*04	63.5	None	-1.0	H1	14	H1-14-*	-1	WTSEDIFERTeLIH	BBBAAAAAABABBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*04	63.5	None	-1.0	H2	10	H2-10-*	-1	WVKTVTGAVN
H	heavy	Homo.sapiens	Hu_IGHV1-3*04	63.5	Hu_IGHV1-3*04	100.0	H3	16	H3-16-*	-1	ARQKFYTggQGWYFDL
H	heavy	Homo.sapiens	Hu_IGHV1-3*04	63.5	Hu_IGHV1-3*04	50.0	H4	8	H4-8-1	15	RDRDLFTA	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	None	0.0	L1	9	L1-9-*	-1	TAASYGHMT
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	None	37.5	L2	8	L2-8-1	12	FATSKRAS	BLEABBBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	Hu_IGKV3-20*01	0.0	L3	5	L3-5-1	10	QQLEF	BBEAB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	Hu_IGKV3-20*01	16.7	L4	6	L4-6-2	18	QFGKQY	BBEABB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	None	0.0	L1	9	L1-9-*	-1	TAASYGHMT
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	None	37.5	L2	8	L2-8-1	12	FATSKRAS	BLEABBBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	Hu_IGKV3-20*01	0.0	L3	5	L3-5-1	10	QQLEF	BBEAB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	Hu_IGKV3-20*01	16.7	L4	6	L4-6-2	18	QFGKQY	BBEABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	None	0.0	L1	9	L1-9-*	-1	TAASYGHMT
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	None	37.5	L2	8	L2-8-1	12	FATSKRAS	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	Hu_IGKV3-20*01	0.0	L3	5	L3-5-1	10	QQLEF	BBEAB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	81.2	Hu_IGKV3-20*01	16.7	L4	6	L4-6-2	18	QFGKQY	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022