PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RQR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	76.9	H1	13	H1-13-*	-1	EASGFIFSTYGMH	BBBLBBBABEBBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	80.0	H2	10	H2-10-*	-1	VIWFDGSNIY	BBBAALBLBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	50.0	H3	13	H3-13-*	-1	HRNFYDGSGPFDY	BBBBBBAAEBBBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	87.5	H4	8	H4-8-*	-1	RDNSKNTV	BBAABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	94.2	Hu_IGKV1-5*03	81.8	L1	11	L1-11-1	5	RASQSISRWVA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	94.2	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	7	YKASSLES	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	94.2	Hu_IGKV1-5*03	71.4	L3	9	L3-9-2	29	QQYTSYGRT	BBAABABBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	94.2	Hu_IGKV1-5*03	66.7	L4	6	L4-6-1	6	GSETDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	76.9	H1	13	H1-13-*	-1	EASGFIFSTYGMH	BBBLBBBABEBBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	80.0	H2	10	H2-10-*	-1	VIWFDGSNIY	BBBAALBLBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	50.0	H3	13	H3-13-*	-1	HRNFYDGSGPFDY	BBBBBBAAEBBBB
H	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	87.5	H4	8	H4-8-*	-1	RDNSKNTV	BBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	94.2	Hu_IGKV1-5*03	81.8	L1	11	L1-11-1	4	RASQSISRWVA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	94.2	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	6	YKASSLES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	94.2	Hu_IGKV1-5*03	71.4	L3	9	L3-9-2	28	QQYTSYGRT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	94.2	Hu_IGKV1-5*03	66.7	L4	6	L4-6-1	11	GSETDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022