PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RQ6

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV4-61*02	95.9	Hu_IGHV4-61*02	86.7	H1	15	H1-15-2	11	TVAGGSISSgtYYWS	BBBLEBAABAABBBB
D	heavy	Homo.sapiens	Hu_IGHV4-61*02	95.9	Hu_IGHV4-61*02	88.9	H2	9	H2-9-1	13	RIYTSGSAN	BBBAALBBB
D	heavy	Homo.sapiens	Hu_IGHV4-61*02	95.9	Hu_IGHV4-61*02	100.0	H3	16	H3-16-*	-1	AREYSSSYYyfYYMDV
D	heavy	Homo.sapiens	Hu_IGHV4-61*02	95.9	Hu_IGHV4-61*02	100.0	H4	8	H4-8-1	13	VDTSKNQF	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	6	QASQDISNYLN	BBABBAEABBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	87.5	L2	8	L2-8-*	-1	YVASNLET	ABAABBBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	85.7	L3	9	L3-9-2	23	QQFDNlPYT	BBAABABBB
E	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	16	GFGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-61*02	95.9	Hu_IGHV4-61*02	86.7	H1	15	H1-15-2	11	TVAGGSISSgtYYWS	BBBLEBAABAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*02	95.9	Hu_IGHV4-61*02	88.9	H2	9	H2-9-1	13	RIYTSGSAN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*02	95.9	Hu_IGHV4-61*02	100.0	H3	16	H3-16-*	-1	AREYSSSYYyfYYMDV
H	heavy	Homo.sapiens	Hu_IGHV4-61*02	95.9	Hu_IGHV4-61*02	100.0	H4	8	H4-8-1	13	VDTSKNQF	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV4-61*02	95.9	Hu_IGHV4-61*02	86.7	H1	15	H1-15-2	11	TVAGGSISSgtYYWS	BBBLEBAABAABBBB
J	heavy	Homo.sapiens	Hu_IGHV4-61*02	95.9	Hu_IGHV4-61*02	88.9	H2	9	H2-9-1	13	RIYTSGSAN	BBBAALBBB
J	heavy	Homo.sapiens	Hu_IGHV4-61*02	95.9	Hu_IGHV4-61*02	100.0	H3	16	H3-16-*	-1	AREYSSSYYyfYYMDV
J	heavy	Homo.sapiens	Hu_IGHV4-61*02	95.9	Hu_IGHV4-61*02	100.0	H4	8	H4-8-1	13	VDTSKNQF	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	5	QASQDISNYLN	BBABBAEABBB
K	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	87.5	L2	8	L2-8-*	-1	YVASNLET	ABAABBBB
K	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	85.7	L3	9	L3-9-2	23	QQFDNlPYT	BBAABABBB
K	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	10	GFGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	6	QASQDISNYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	87.5	L2	8	L2-8-*	-1	YVASNLET	ABAABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	85.7	L3	9	L3-9-2	23	QQFDNlPYT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	9	GFGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022