PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RM1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H1	13	H1-13-1	11	KASGYTFTNYGMN	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	90.0	H2	10	H2-10-1	16	WINSNTGEPT	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H3	12	H3-12-*	-1	ARWANCGCAMDY	BBBBAALABBAB
A	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H4	8	H4-8-1	10	LETSASTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	82.4	L1	17	L1-17-*	-1	KSSQSLftsgkqKNYLT	BBABBABALAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	87.5	L2	8	L2-8-1	15	YWASTRNS	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	100.0	L3	9	L3-9-cis7-1	24	QNDYSYPFT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	100.0	L4	6	L4-6-1	17	GSGTDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H1	13	H1-13-1	12	KASGYTFTNYGMN	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	90.0	H2	10	H2-10-1	16	WINSNTGEPT	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H3	12	H3-12-*	-1	ARWANCGCAMDY	BBBBAALABBAB
C	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H4	8	H4-8-1	10	LETSASTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	82.4	L1	17	L1-17-*	-1	KSSQSLftsgkqKNYLT	BBABBABALAALBBBBB
D	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	87.5	L2	8	L2-8-1	15	YWASTRNS	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	100.0	L3	9	L3-9-cis7-1	24	QNDYSYPFT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	100.0	L4	6	L4-6-1	17	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022