PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RM0

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H1	13	H1-13-1	12	KASGYTFTNYGMN	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	90.0	H2	10	H2-10-1	13	WINSNTGEPT	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H3	12	H3-12-*	-1	ARWANCGCAMDY	BBBBAALABBAB
A	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H4	8	H4-8-1	5	LETSASTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	82.4	L1	17	L1-17-1	10	KSSQSLftsgkqKNYLT	BBABBABBAAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	87.5	L2	8	L2-8-1	11	YWASTRNS	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	100.0	L3	9	L3-9-cis7-1	20	QNDYSYPFT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H1	13	H1-13-1	13	KASGYTFTNYGMN	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	90.0	H2	10	H2-10-1	13	WINSNTGEPT	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H3	12	H3-12-*	-1	ARWANCGCAMDY	BBBBAALABBAB
C	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H4	8	H4-8-1	5	LETSASTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	82.4	L1	17	L1-17-1	10	KSSQSLftsgkqKNYLT	BBABBABBAAALBBBBB
D	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	87.5	L2	8	L2-8-1	10	YWASTRNS	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	100.0	L3	9	L3-9-cis7-1	20	QNDYSYPFT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
E	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H1	13	H1-13-1	13	KASGYTFTNYGMN	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	90.0	H2	10	H2-10-1	14	WINSNTGEPT	BBBAAALBBB
E	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H3	12	H3-12-*	-1	ARWANCGCAMDY	BBBBAALABBAB
E	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H4	8	H4-8-1	5	LETSASTA	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	82.4	L1	17	L1-17-1	9	KSSQSLftsgkqKNYLT	BBABBABBAAALBBBBB
F	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	87.5	L2	8	L2-8-1	11	YWASTRNS	BLLABBBB
F	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	100.0	L3	9	L3-9-cis7-1	20	QNDYSYPFT	BBAABBbBB
F	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
G	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H1	13	H1-13-1	13	KASGYTFTNYGMN	BBBLBBAAABBBB
G	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	90.0	H2	10	H2-10-1	16	WINSNTGEPT	BBBAAALBBB
G	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H3	12	H3-12-*	-1	ARWANCGCAMDY	BBBBAALABBAB
G	heavy	Mus.musculus	Mo_IGHV9-3*02	100.0	Mo_IGHV9-3*02	100.0	H4	8	H4-8-1	6	LETSASTA	BBAAALBB
H	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	82.4	L1	17	L1-17-1	10	KSSQSLftsgkqKNYLT	BBABBABBAAALBBBBB
H	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	87.5	L2	8	L2-8-1	11	YWASTRNS	BLLABBBB
H	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	100.0	L3	9	L3-9-cis7-1	19	QNDYSYPFT	BBAABBbBB
H	kappa	Mus.musculus	Mo_IGKV8-19*01	97.1	Mo_IGKV8-19*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022