PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RLZ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1S30*02	85.7	Mo_IGHV1S30*02	100.0	H1	13	H1-13-1	7	KASGYSFTGYYMH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1S30*02	85.7	Mo_IGHV1S30*02	60.0	H2	10	H2-10-1	7	RIDPYDGATS	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1S30*02	85.7	Mo_IGHV1S30*02	100.0	H3	14	H3-14-2	16	AREGHWDGDWYFDV	BBBBBBLLBBBBAB
A	heavy	Mus.musculus	Mo_IGHV1S30*02	85.7	Mo_IGHV1S30*02	62.5	H4	8	H4-8-1	5	VDKSSTTG	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV1-132*01	97.1	Mo_IGKV1-132*01	93.8	L1	16	L1-16-1	6	KSSQSLlhsngKTYLN	BBABBABBAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV1-132*01	97.1	Mo_IGKV1-132*01	87.5	L2	8	L2-8-*	-1	YLVSKLDP	BLEABBBA
B	kappa	Mus.musculus	Mo_IGKV1-132*01	97.1	Mo_IGKV1-132*01	100.0	L3	9	L3-9-cis7-1	12	LQGTYYPFT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV1-132*01	97.1	Mo_IGKV1-132*01	100.0	L4	6	L4-6-3	8	GSETDF	EBAABB
C	kappa	Mus.musculus	Mo_IGKV1-132*01	97.1	Mo_IGKV1-132*01	93.8	L1	16	L1-16-1	7	KSSQSLlhsngKTYLN	BBABBABBAALBBBBB
C	kappa	Mus.musculus	Mo_IGKV1-132*01	97.1	Mo_IGKV1-132*01	87.5	L2	8	L2-8-*	-1	YLVSKLDP	BLEABBBA
C	kappa	Mus.musculus	Mo_IGKV1-132*01	97.1	Mo_IGKV1-132*01	100.0	L3	9	L3-9-cis7-1	12	LQGTYYPFT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV1-132*01	97.1	Mo_IGKV1-132*01	100.0	L4	6	L4-6-3	8	GSETDF	EBAABB
D	heavy	Mus.musculus	Mo_IGHV1S30*02	85.7	Mo_IGHV1S30*02	100.0	H1	13	H1-13-1	7	KASGYSFTGYYMH	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV1S30*02	85.7	Mo_IGHV1S30*02	60.0	H2	10	H2-10-1	7	RIDPYDGATS	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV1S30*02	85.7	Mo_IGHV1S30*02	100.0	H3	14	H3-14-2	16	AREGHWDGDWYFDV	BBBBBBLLBBBBAB
D	heavy	Mus.musculus	Mo_IGHV1S30*02	85.7	Mo_IGHV1S30*02	62.5	H4	8	H4-8-1	5	VDKSSTTG	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022