PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RKU

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	93.3	H1	15	H1-15-*	-1	TVSGGSISssRYYWG	BBBLEBABLBABBBB
E	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	100.0	H2	9	H2-9-1	17	SIYYSGSTY	BBBAALBBB
E	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	100.0	H3	21	H3-21-*	-1	ARHAAAYYDrsgyyfiEYFQH
E	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	100.0	H4	8	H4-8-1	12	VDTSKNQF	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L1	11	L1-11-1	6	RASQSISSWLA	BBABBAEABBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	6	YKASSLES	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	71.4	L3	9	L3-9-1	26	QQYNNYRYT	BBABLLBBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	10	GSGTEF	EBEABB
G	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	93.3	H1	15	H1-15-*	-1	TVSGGSISssRYYWG	BBBLEBABLBABBBB
G	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	100.0	H2	9	H2-9-1	17	SIYYSGSTY	BBBAALBBB
G	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	100.0	H3	21	H3-21-*	-1	ARHAAAYYDrsgyyfiEYFQH
G	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	100.0	H4	8	H4-8-1	13	VDTSKNQF	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	93.3	H1	15	H1-15-*	-1	TVSGGSISssRYYWG	BBBLEBAAABABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	100.0	H2	9	H2-9-1	17	SIYYSGSTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	100.0	H3	21	H3-21-*	-1	ARHAAAYYDrsgyyfiEYFQH
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	100.0	H4	8	H4-8-1	11	VDTSKNQF	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L1	11	L1-11-1	6	RASQSISSWLA	BBABBAEABBB
I	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	6	YKASSLES	BLLABBBB
I	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	71.4	L3	9	L3-9-*	-1	QQYNNYRYT	BBABEABBB
I	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	9	GSGTEF	EBEABB
J	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	93.3	H1	15	H1-15-*	-1	TVSGGSISssRYYWG	BBBLEBABLBABBBB
J	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	100.0	H2	9	H2-9-1	18	SIYYSGSTY	BBBAALBBB
J	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	100.0	H3	21	H3-21-*	-1	ARHAAAYYDrsgyyfiEYFQH
J	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	100.0	H4	8	H4-8-1	13	VDTSKNQF	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L1	11	L1-11-1	6	RASQSISSWLA	BBABBAEABBB
K	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	7	YKASSLES	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	71.4	L3	9	L3-9-*	-1	QQYNNYRYT	BBABBABBB
K	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	8	GSGTEF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L1	11	L1-11-1	5	RASQSISSWLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	6	YKASSLES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	71.4	L3	9	L3-9-1	26	QQYNNYRYT	BBABLLBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	9	GSGTEF	EBEABB

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