PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RKS

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	92.3	H1	13	H1-13-1	9	AASGFTFSNYAMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	100.0	H2	10	H2-10-2	6	VISYDGSNKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	50.0	H3	20	H3-20-*	-1	ASGYTGYdyfvrgDYYGLDV
H	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	92.3	H1	13	H1-13-1	9	AASGFTFSNYAMH	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	100.0	H2	10	H2-10-2	5	VISYDGSNKY	BBBAALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	50.0	H3	20	H3-20-*	-1	ASGYTGYdyfvrgDYYGLDV
I	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	98.5	Hu_IGLV4-69*01	100.0	L1	12	L1-12-*	-1	TLSSGHSSYAIA	BBBAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	98.5	Hu_IGLV4-69*01	91.7	L2	12	L2-12-2	7	KLNtdgsHSKGD	BBBAALBBBBBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	98.5	Hu_IGLV4-69*01	100.0	L3	9	L3-9-*	-1	QTWGTGILV	BBBBBLBBB
L	lambda	Homo.sapiens	Hu_IGLV4-69*01	98.5	Hu_IGLV4-69*01	100.0	L4	6	L4-6-2	11	SSGAER	BBEABB
M	lambda	Homo.sapiens	Hu_IGLV4-69*01	98.5	Hu_IGLV4-69*01	100.0	L1	12	L1-12-*	-1	TLSSGHSSYAIA	BBBAAAAABBBB
M	lambda	Homo.sapiens	Hu_IGLV4-69*01	98.5	Hu_IGLV4-69*01	91.7	L2	12	L2-12-2	6	KLNtdgsHSKGD	BBBAALBBBBBB
M	lambda	Homo.sapiens	Hu_IGLV4-69*01	98.5	Hu_IGLV4-69*01	100.0	L3	9	L3-9-*	-1	QTWGTGILV	BBBBBLBBB
M	lambda	Homo.sapiens	Hu_IGLV4-69*01	98.5	Hu_IGLV4-69*01	100.0	L4	6	L4-6-2	12	SSGAER	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022