PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RK2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Mus.musculus	Mo_IGHV2-2*02	100.0	Mo_IGHV2-2*02	100.0	H1	13	H1-13-1	15	TVSGFSLTSYGVH	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV2-2*02	100.0	Mo_IGHV2-2*02	100.0	H2	9	H2-9-1	7	VIWSGGSTD	BBBAALBBB
C	heavy	Mus.musculus	Mo_IGHV2-2*02	100.0	Mo_IGHV2-2*02	100.0	H3	11	H3-11-1	18	ARNSLLDAMDY	BBBBAALBBAB
C	heavy	Mus.musculus	Mo_IGHV2-2*02	100.0	Mo_IGHV2-2*02	100.0	H4	8	H4-8-1	6	KDNSKSQV	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV6-32*01	100.0	Mo_IGKV6-32*01	90.9	L1	11	L1-11-1	7	KASQSVSNAVA	BBABBAEABBB
C	kappa	Mus.musculus	Mo_IGKV6-32*01	100.0	Mo_IGKV6-32*01	100.0	L2	8	L2-8-1	7	YYASNRYT	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV6-32*01	100.0	Mo_IGKV6-32*01	100.0	L3	9	L3-9-cis7-1	9	QQDYSSPLT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV6-32*01	100.0	Mo_IGKV6-32*01	100.0	L4	6	L4-6-1	3	GYGTDF	EBEABB
D	heavy	Mus.musculus	Mo_IGHV2-2*02	100.0	Mo_IGHV2-2*02	100.0	H1	13	H1-13-1	16	TVSGFSLTSYGVH	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV2-2*02	100.0	Mo_IGHV2-2*02	100.0	H2	9	H2-9-1	12	VIWSGGSTD	BBBAALBBB
D	heavy	Mus.musculus	Mo_IGHV2-2*02	100.0	Mo_IGHV2-2*02	100.0	H3	11	H3-11-1	20	ARNSLLDAMDY	BBBBAALBBAB
D	heavy	Mus.musculus	Mo_IGHV2-2*02	100.0	Mo_IGHV2-2*02	100.0	H4	8	H4-8-1	9	KDNSKSQV	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV6-32*01	100.0	Mo_IGKV6-32*01	90.9	L1	11	L1-11-1	10	KASQSVSNAVA	BBABBAEABBB
D	kappa	Mus.musculus	Mo_IGKV6-32*01	100.0	Mo_IGKV6-32*01	100.0	L2	8	L2-8-1	9	YYASNRYT	BLEABBBB
D	kappa	Mus.musculus	Mo_IGKV6-32*01	100.0	Mo_IGKV6-32*01	100.0	L3	9	L3-9-cis7-1	7	QQDYSSPLT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV6-32*01	100.0	Mo_IGKV6-32*01	100.0	L4	6	L4-6-1	7	GYGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022