PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RGP

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	84.6	H1	13	H1-13-1	20	SASGFAFSSFGMH	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	90.0	H2	10	H2-10-4	11	YISSGSGTIY	BBBBLLABBB
E	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	50.0	H3	14	H3-14-*	-1	VRSIYYYGSSPFDF	BBBBBBBLBBBLAB
E	heavy	Mus.musculus	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	87.5	H4	8	H4-8-1	12	RDDPKNTL	BBAAALBB
E	kappa	Mus.musculus	Mo_IGKV2-137*01	94.2	Mo_IGKV2-137*01	100.0	L1	16	L1-16-1	14	RSSKSLlhsngNTYLY	BBABBABBAALBBBBB
E	kappa	Mus.musculus	Mo_IGKV2-137*01	94.2	Mo_IGKV2-137*01	100.0	L2	8	L2-8-1	13	YRMSNLAS	BLLABBBB
E	kappa	Mus.musculus	Mo_IGKV2-137*01	94.2	Mo_IGKV2-137*01	100.0	L3	9	L3-9-cis7-1	17	MQHLEYPLT	BBAABBbBB
E	kappa	Mus.musculus	Mo_IGKV2-137*01	94.2	Mo_IGKV2-137*01	100.0	L4	6	L4-6-*	-1	GSGTAF	EBBLBB
N	heavy	Lama.glama	La_IGHV1S6*01	91.8	La_IGHV1S6*01	69.2	H1	13	H1-13-1	21	AASGFTFSNYKMN	BBBLBBAAABBBB
N	heavy	Lama.glama	La_IGHV1S6*01	91.8	La_IGHV1S6*01	10.0	H2	10	H2-10-2	23	DISQSGASIS	BBBAALABBB
N	heavy	Lama.glama	La_IGHV1S6*01	91.8	La_IGHV1S6*01	50.0	H3	21	H3-21-*	-1	ARcpapftrDCFDVTSTTYAY
N	heavy	Lama.glama	La_IGHV1S6*01	91.8	La_IGHV1S6*01	87.5	H4	8	H4-8-1	9	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022