PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RFP

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-4*02	84.7	Mo_IGHV5-4*02	61.5	H1	13	H1-13-*	-1	SASGFIFSNSYMA	BAELBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-4*02	84.7	Mo_IGHV5-4*02	60.0	H2	10	H2-10-2	15	TINPSGSRTY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-4*02	84.7	Mo_IGHV5-4*02	100.0	H3	9	H3-9-*	-1	ARHDLSFDY	BBABLELAB
H	heavy	Mus.musculus	Mo_IGHV5-4*02	84.7	Mo_IGHV5-4*02	62.5	H4	8	H4-8-1	18	RDTAKSSL	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV5-4*02	84.7	Mo_IGHV5-4*02	61.5	H1	13	H1-13-*	-1	SASGFIFSNSYMA	BAELBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV5-4*02	84.7	Mo_IGHV5-4*02	60.0	H2	10	H2-10-2	14	TINPSGSRTY	BBBAALABBB
I	heavy	Mus.musculus	Mo_IGHV5-4*02	84.7	Mo_IGHV5-4*02	100.0	H3	9	H3-9-*	-1	ARHDLSFDY	BBABLELAB
I	heavy	Mus.musculus	Mo_IGHV5-4*02	84.7	Mo_IGHV5-4*02	62.5	H4	8	H4-8-1	18	RDTAKSSL	BBAAALBB
L	lambda	Mus.musculus	Ra_IGLV2S1*01	98.6	Ra_IGLV2S1*01	76.9	L1	13	L1-13-*	-1	DRSSGGIRDSYVS	BAELAEBAAABBB
L	lambda	Mus.musculus	Ra_IGLV2S1*01	98.6	Ra_IGLV2S1*01	100.0	L2	8	L2-8-*	-1	YADDQRPS	BLLBLBBB
L	lambda	Mus.musculus	Ra_IGLV2S1*01	98.6	Ra_IGLV2S1*01	60.0	L3	11	L3-11-*	-1	QSYDSDFDVYI	BBBLAAAABBB
L	lambda	Mus.musculus	Ra_IGLV2S1*01	98.6	Ra_IGLV2S1*01	100.0	L4	8	L4-8-*	-1	idSSSNSA	BBELALAB
M	lambda	Mus.musculus	Ra_IGLV2S1*01	98.6	Ra_IGLV2S1*01	76.9	L1	13	L1-13-*	-1	DRSSGGIRDSYVS	BALLALBABBBBB
M	lambda	Mus.musculus	Ra_IGLV2S1*01	98.6	Ra_IGLV2S1*01	100.0	L2	8	L2-8-*	-1	YADDQRPS	BLLBLBBB
M	lambda	Mus.musculus	Ra_IGLV2S1*01	98.6	Ra_IGLV2S1*01	60.0	L3	11	L3-11-*	-1	QSYDSDFDVYI	BBBLAAAABBB
M	lambda	Mus.musculus	Ra_IGLV2S1*01	98.6	Ra_IGLV2S1*01	100.0	L4	8	L4-8-*	-1	idSSSNSA	BBELALAB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022