PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RFC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	93.2	Hu_IGHV1-69*06	46.2	H1	13	H1-13-*	-1	TTSGGSFGRDAVS	BBAAEBBBLBBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	93.2	Hu_IGHV1-69*06	80.0	H2	10	H2-10-1	14	GIIPIFGTSS	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	93.2	Hu_IGHV1-69*06	50.0	H3	17	H3-17-*	-1	VRWSFGDYGlflTEGDY
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	93.2	Hu_IGHV1-69*06	87.5	H4	8	H4-8-*	-1	AGKSTSTA	BBAABABB
B	kappa	Homo.sapiens	Hu_IGKV3-20*02	94.2	CDRLenMismatch	-1.0	L1	11	L1-11-*	-1	RASQSVDKYFA	BBABBBBELBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*02	94.2	Hu_IGKV3-20*02	62.5	L2	8	L2-8-1	8	YETSKRAT	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*02	94.2	Hu_IGKV3-20*02	0.0	L3	11	L3-11-*	-1	HHRGNWPpsFT	BBBEEBbBBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*02	94.2	Hu_IGKV3-20*02	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	93.2	Hu_IGHV1-69*06	46.2	H1	13	H1-13-*	-1	TTSGGSFGRDAVS	BBAAEBBBLBBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	93.2	Hu_IGHV1-69*06	80.0	H2	10	H2-10-1	14	GIIPIFGTSS	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	93.2	Hu_IGHV1-69*06	50.0	H3	17	H3-17-*	-1	VRWSFGDYGlflTEGDY
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	93.2	Hu_IGHV1-69*06	87.5	H4	8	H4-8-*	-1	AGKSTSTA	BBAABABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*02	94.2	CDRLenMismatch	-1.0	L1	11	L1-11-*	-1	RASQSVDKYFA	BBABBBBAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*02	94.2	Hu_IGKV3-20*02	62.5	L2	8	L2-8-1	8	YETSKRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*02	94.2	Hu_IGKV3-20*02	0.0	L3	11	L3-11-*	-1	HHRGNWPpsFT	BBBEEBbBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*02	94.2	Hu_IGKV3-20*02	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022