PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RE9

#CDRs = 8; #Clusters = 10.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	87.7	Hu_IGHV5-10-1*01	69.2	H1	13	H1-13-1	8	KASGYSFPNYWIT	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	87.7	Hu_IGHV5-10-1*01	80.0	H2	10	H2-10-1	12	RIDPGDSYTT	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	87.7	Hu_IGHV5-10-1*01	100.0	H3	10	H3-10-*	-1	ARYYVSLVDI	BBBBEABBAB
A	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	87.7	Hu_IGHV5-10-1*01	62.5	H4	8	H4-8-1	9	IDKSTNTA	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	100.0	L1	14	L1-14-2	13	TGTSSDVGgYNYVS	BBBAAAAAABABBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	75.0	L2	8	L2-8-1	17	YDVNNRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	55.6	L3	10	L3-10-*	-1	SSYTTGSRAV	BBBBBLLBBB
B	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	9	KSGNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	87.7	Hu_IGHV5-10-1*01	69.2	H1	13	H1-13-1	7	KASGYSFPNYWIT	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	87.7	Hu_IGHV5-10-1*01	80.0	H2	10	H2-10-1	12	RIDPGDSYTT	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	87.7	Hu_IGHV5-10-1*01	100.0	H3	10	H3-10-2	12	ARYYVSLVDI	BBBBEABBAB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	87.7	Hu_IGHV5-10-1*01	62.5	H4	8	H4-8-1	8	IDKSTNTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	100.0	L1	14	L1-14-2	13	TGTSSDVGgYNYVS	BBBAAAAAABABBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	75.0	L2	8	L2-8-*	-1	YDVNNRPS	BLEABBBA
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	55.6	L3	10	L3-10-*	-1	SSYTTGSRAV	BBBBBLLBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	97.1	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	13	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022