PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RD5

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV15-103*01	97.1	Mo_IGKV15-103*01	90.9	L1	11	L1-11-1	12	HASQNINAWLS	BBABBAEABBB
A	kappa	Mus.musculus	Mo_IGKV15-103*01	97.1	Mo_IGKV15-103*01	87.5	L2	8	L2-8-1	17	YKASNLYT	BLEABBBB
A	kappa	Mus.musculus	Mo_IGKV15-103*01	97.1	Mo_IGKV15-103*01	85.7	L3	9	L3-9-cis7-1	14	QQGQSSPYT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV15-103*01	97.1	Mo_IGKV15-103*01	83.3	L4	6	L4-6-1	25	GSGTRF	EBEABB
B	heavy	Mus.musculus	Mo_IGHV1-75*01	90.4	Mo_IGHV1-75*01	92.3	H1	13	H1-13-1	9	KASGYTFSDYYIN	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1-75*01	90.4	Mo_IGHV1-75*01	90.0	H2	10	H2-10-1	10	WIFPGSGNTY	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1-75*01	90.4	Mo_IGHV1-75*01	50.0	H3	11	H3-11-*	-1	VRRYDYDGFAF	BBBBABABBAB
B	heavy	Mus.musculus	Mo_IGHV1-75*01	90.4	Mo_IGHV1-75*01	100.0	H4	8	H4-8-1	11	VDKSSSTA	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV15-103*01	97.1	Mo_IGKV15-103*01	90.9	L1	11	L1-11-1	12	HASQNINAWLS	BBABBAEABBB
C	kappa	Mus.musculus	Mo_IGKV15-103*01	97.1	Mo_IGKV15-103*01	87.5	L2	8	L2-8-1	17	YKASNLYT	BLEABBBB
C	kappa	Mus.musculus	Mo_IGKV15-103*01	97.1	Mo_IGKV15-103*01	85.7	L3	9	L3-9-cis7-1	14	QQGQSSPYT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV15-103*01	97.1	Mo_IGKV15-103*01	83.3	L4	6	L4-6-1	24	GSGTRF	EBEABB
D	heavy	Mus.musculus	Mo_IGHV1-75*01	90.4	Mo_IGHV1-75*01	92.3	H1	13	H1-13-1	10	KASGYTFSDYYIN	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV1-75*01	90.4	Mo_IGHV1-75*01	90.0	H2	10	H2-10-1	10	WIFPGSGNTY	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV1-75*01	90.4	Mo_IGHV1-75*01	50.0	H3	11	H3-11-*	-1	VRRYDYDGFAF	BBBBABABBAB
D	heavy	Mus.musculus	Mo_IGHV1-75*01	90.4	Mo_IGHV1-75*01	100.0	H4	8	H4-8-1	11	VDKSSSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022