PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RBV

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	98.6	Hu_IGHV4-39*01	100.0	H1	15	H1-15-*	-1	TVSGGSIssSSYYWG	BBBLLEAAABABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	98.6	Hu_IGHV4-39*01	100.0	H2	9	H2-9-*	-1	SIYYSGSTY	BBBBLELBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	98.6	Hu_IGHV4-39*01	100.0	H3	19	H3-19-*	-1	ARCRPEYYfgsgsYLDFDY
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	98.6	Hu_IGHV4-39*01	100.0	H4	8	H4-8-*	-1	VDTSKNQF	BBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-12*01	100.0	Hu_IGKV1-12*01	100.0	L1	11	L1-11-*	-1	RASQGISSWLA	BBABALBLBBB
L	kappa	Homo.sapiens	Hu_IGKV1-12*01	100.0	Hu_IGKV1-12*01	100.0	L2	8	L2-8-*	-1	YAASSLQS	BEBLBBBL
L	kappa	Homo.sapiens	Hu_IGKV1-12*01	100.0	Hu_IGKV1-12*01	100.0	L3	9	L3-9-2	13	QQANSFPLT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV1-12*01	100.0	Hu_IGKV1-12*01	100.0	L4	6	L4-6-*	-1	GSGTDF	BBAABB
h	heavy	Homo.sapiens	Hu_IGHV4-39*01	98.6	Hu_IGHV4-39*01	100.0	H1	15	H1-15-*	-1	TVSGGSIssSSYYWG	BBBLLEAAABABBBB
h	heavy	Homo.sapiens	Hu_IGHV4-39*01	98.6	Hu_IGHV4-39*01	100.0	H2	9	H2-9-*	-1	SIYYSGSTY	BBBBLELBB
h	heavy	Homo.sapiens	Hu_IGHV4-39*01	98.6	Hu_IGHV4-39*01	100.0	H3	19	H3-19-*	-1	ARCRPEYYfgsgsYLDFDY
h	heavy	Homo.sapiens	Hu_IGHV4-39*01	98.6	Hu_IGHV4-39*01	100.0	H4	8	H4-8-*	-1	VDTSKNQF	BBAABBBB
l	kappa	Homo.sapiens	Hu_IGKV1-12*01	100.0	Hu_IGKV1-12*01	100.0	L1	11	L1-11-*	-1	RASQGISSWLA	BBABALBLBBB
l	kappa	Homo.sapiens	Hu_IGKV1-12*01	100.0	Hu_IGKV1-12*01	100.0	L2	8	L2-8-*	-1	YAASSLQS	BEBLBBBL
l	kappa	Homo.sapiens	Hu_IGKV1-12*01	100.0	Hu_IGKV1-12*01	100.0	L3	9	L3-9-2	15	QQANSFPLT	BBAABABBB
l	kappa	Homo.sapiens	Hu_IGKV1-12*01	100.0	Hu_IGKV1-12*01	100.0	L4	6	L4-6-*	-1	GSGTDF	BBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022