PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7RAH

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L1	11	L1-11-2	7	RASQDISNYLN	BBABBALLBBB
A	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L2	8	L2-8-1	4	YYTSRLHS	BLLABBBB
A	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L3	9	L3-9-cis7-1	16	QQGNTLPYT	BBAABBbBB
A	kappa	Mus.musculus	Mo_IGKV10-96*01	97.1	Mo_IGKV10-96*01	100.0	L4	6	L4-6-1	8	GSGTDY	EBEABB
B	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H1	13	H1-13-1	7	AASGFTFSSYGMS	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	90.0	H2	10	H2-10-2	6	TISSGGTYTY	BBBAALABBB
B	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H3	14	H3-14-2	13	AREIMRGGGYYFDY	BBBBBBLLBBBBAB
B	heavy	Mus.musculus	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H4	8	H4-8-1	4	RDNAKNTL	BBAAALBB
C	kappa	Mus.musculus	Mo_IGKV4-74*01	97.1	Mo_IGKV4-74*01	100.0	L1	12	L1-12-1	7	TASSSVSsSYLH	BBABBBBAAABB
C	kappa	Mus.musculus	Mo_IGKV4-74*01	97.1	Mo_IGKV4-74*01	100.0	L2	8	L2-8-1	9	YSTSNLAS	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV4-74*01	97.1	Mo_IGKV4-74*01	100.0	L3	9	L3-9-cis7-1	6	HQYHRSPPT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV4-74*01	97.1	Mo_IGKV4-74*01	100.0	L4	6	L4-6-1	9	GSGTSY	EBEABB
D	heavy	Mus.musculus	Mo_IGHV1-54*03	97.3	Mo_IGHV1-54*03	100.0	H1	13	H1-13-1	10	KASGYAFTNYLIE	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV1-54*03	97.3	Mo_IGHV1-54*03	80.0	H2	10	H2-10-1	7	VINPGIGNTN	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV1-54*03	97.3	Mo_IGHV1-54*03	100.0	H3	16	H3-16-*	-1	ARGLNYgsSQHWYFDV
D	heavy	Mus.musculus	Mo_IGHV1-54*03	97.3	Mo_IGHV1-54*03	87.5	H4	8	H4-8-1	4	ADKSSSTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022