PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7R8M

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H1	13	H1-13-1	14	KGSGYSFTSYWIG	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H2	10	H2-10-1	17	IIYPGDSDTR	BBBAAALBBB
D	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H3	12	H3-12-*	-1	ARGVAVDWYFDL	BBBBBEALBBAB
D	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H4	8	H4-8-1	24	ADKSISTA	BBAAALBB
E	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	100.0	L1	14	L1-14-3	13	TGSSSNIGAgYDVH	BBBAAAAAALBBBB
E	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	100.0	L2	8	L2-8-1	21	YGNSNRPS	BLLABBBB
E	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	88.9	L3	12	L3-12-*	-1	QSYDSSLSAlYV
E	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	100.0	L4	6	L4-6-2	15	KSGTSA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H1	13	H1-13-1	17	KGSGYSFTSYWIG	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H2	10	H2-10-1	16	IIYPGDSDTR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H3	12	H3-12-*	-1	ARGVAVDWYFDL	BBBBBELLBBAB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	100.0	Hu_IGHV5-51*01	100.0	H4	8	H4-8-1	9	ADKSISTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	100.0	L1	14	L1-14-3	18	TGSSSNIGAgYDVH	BBBAAAAAALBBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	100.0	L2	8	L2-8-1	20	YGNSNRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	88.9	L3	12	L3-12-*	-1	QSYDSSLSAlYV
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	100.0	Hu_IGLV1-40*01	100.0	L4	6	L4-6-2	14	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022