PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7R8L

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV5-51*01	93.2	Hu_IGHV5-51*01	76.9	H1	13	H1-13-*	-1	KGSGYGFITYWIG	BBBEBLAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV5-51*01	93.2	Hu_IGHV5-51*01	90.0	H2	10	H2-10-1	14	IIYPGDSETR	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV5-51*01	93.2	Hu_IGHV5-51*01	50.0	H3	12	H3-12-*	-1	AGGSGISTPMDV	BBBBEBLBBBAB
C	heavy	Homo.sapiens	Hu_IGHV5-51*01	93.2	Hu_IGHV5-51*01	87.5	H4	8	H4-8-1	8	ADKSINTA	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	94.1	L1	17	L1-17-1	9	KSSQSVlyssinKNYLA	BBABBABBAAALBBBBB
D	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	4	YWASTRES	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	100.0	L3	9	L3-9-cis7-1	8	QQYYSTPYT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.8	Hu_IGHV3-53*01	92.3	H1	13	H1-13-1	15	AASGITVSSNYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.8	Hu_IGHV3-53*01	66.7	H2	9	H2-9-1	8	VMYAGGSTF	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.8	Hu_IGHV3-53*01	100.0	H3	12	H3-12-*	-1	ARDLYSSGGTDI	BBBAEAAEBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-53*01	95.8	Hu_IGHV3-53*01	87.5	H4	8	H4-8-1	10	RDDSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSIgSSYLA	BBABBAEAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	11	YGASRRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	100.0	L3	9	L3-9-cis7-1	21	QQYGSSPGT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	83.3	L4	6	L4-6-1	11	GSGADF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022