PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7R40

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	84.6	H1	13	H1-13-*	-1	VASGFTFSSYVMS	BBBLBBAABLBBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	90.0	H2	10	H2-10-*	-1	AISGSGGNTY	BBBAAEEBBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H3	13	H3-13-*	-1	AKEGTYYYGSGSF	BBBBABABBAEBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	22	RDNSKNTL	BBAAALBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	84.6	H1	13	H1-13-*	-1	VASGFTFSSYVMS	BBBLBBAABLBBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	90.0	H2	10	H2-10-*	-1	AISGSGGNTY	BBBAAEEBBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H3	13	H3-13-*	-1	AKEGTYYYGSGSF	BBBBABABBAEBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	22	RDNSKNTL	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	72.7	L1	11	L1-11-*	-1	RASQSFHNYLA	BBBBBBALBBB
F	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	87.5	L2	8	L2-8-*	-1	FDASNRAT	AABLBBBB
F	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	85.7	L3	9	L3-9-*	-1	QQRFNWPLT	BBABLAALB
F	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB
G	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	72.7	L1	11	L1-11-*	-1	RASQSFHNYLA	BBBBBBALBBB
G	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	87.5	L2	8	L2-8-*	-1	FDASNRAT	AABLBBBB
G	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	85.7	L3	9	L3-9-*	-1	QQRFNWPLT	BBABLAALB
G	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	84.6	H1	13	H1-13-*	-1	VASGFTFSSYVMS	BBBLBBAABLBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	90.0	H2	10	H2-10-*	-1	AISGSGGNTY	BBBAAEEBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H3	13	H3-13-*	-1	AKEGTYYYGSGSF	BBBBABABBAEBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	22	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	72.7	L1	11	L1-11-*	-1	RASQSFHNYLA	BBBBBBALBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	87.5	L2	8	L2-8-*	-1	FDASNRAT	AABLBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	85.7	L3	9	L3-9-*	-1	QQRFNWPLT	BBABLAALB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022