PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7R1Z

#CDRs = 4; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV3-3*01_VHH	46.2	H1	13	H1-13-5	13	AASGRTSGALNVA	BBBEBAAABABBB
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV3-3*01_VHH	40.0	H2	10	H2-10-1	12	RLWWNDGTTY	BBBAAALBBB
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV3-3*01_VHH	50.0	H3	11	H3-11-*	-1	AVRTPSSQTLY	BBBBAABABBB
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	84.9	Al_IGHV3-3*01_VHH	62.5	H4	8	H4-8-*	-1	SDNAKKIV	BBAALABB
E	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	92.3	H1	13	H1-13-3	11	AASGRTFSAYAMG	BBBEAAAAABBBB
E	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	90.0	H2	10	H2-10-2	10	AISWSGNSTY	BBBAALABBB
E	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	100.0	H3	19	H3-19-*	-1	AARKPMyrvdiSKGQNYDY
E	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	100.0	H4	8	H4-8-1	7	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022