PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7QNX

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	86.7	H1	15	H1-15-*	-1	TVSGDSISssRYYWG	BBBBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	66.7	H2	9	H2-9-*	-1	TFYYSGITY	BBABBLBBB
A	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	100.0	H3	19	H3-19-*	-1	ARPRPPDYYDNsgallFDI
A	heavy	Homo.sapiens	Hu_IGHV4-39*01	97.3	Hu_IGHV4-39*01	100.0	H4	8	H4-8-1	17	VDTSKNQF	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.6	Hu_IGKV1-5*03	90.9	L1	11	L1-11-1	6	RASQSISAWLA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.6	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	7	YKASSLES	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.6	Hu_IGKV1-5*03	71.4	L3	10	L3-10-*	-1	QQYiSSSPWT	BBAABBBBLA
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.6	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	8	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	84.6	H1	13	H1-13-1	12	AASAFTFSSYDMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	100.0	H2	10	H2-10-2	6	VISYDGSNKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	100.0	H3	14	H3-14-*	-1	AKDGGKLWVYYFDY	BBBALABABBBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	8	RASQSISSYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	5	YAASSLQS	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	85.7	L3	10	L3-10-*	-1	QQSYSTlaLT	BBAABAABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022