PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7QF1

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	4	RASQSISSYLN	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-*	-1	YAASSLQS	AALABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	5	QQSYSNPWT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV1-69*10	98.6	Hu_IGHV1-69*10	92.3	H1	13	H1-13-*	-1	KASGGTYSSYAIS	BBBEABALLBBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*10	98.6	Hu_IGHV1-69*10	100.0	H2	10	H2-10-1	19	GIIPILGIAN	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*10	98.6	Hu_IGHV1-69*10	100.0	H3	17	H3-17-*	-1	ARLPYYYdssGYYYFDY
C	heavy	Homo.sapiens	Hu_IGHV1-69*10	98.6	Hu_IGHV1-69*10	100.0	H4	8	H4-8-1	6	ADKSTSTA	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	5	RASQSISSYLN	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	9	YAASSLQS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	5	QQSYSNPWT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV1-69*10	98.6	Hu_IGHV1-69*10	92.3	H1	13	H1-13-*	-1	KASGGTYSSYAIS	BBAALBAEABBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*10	98.6	Hu_IGHV1-69*10	100.0	H2	10	H2-10-1	19	GIIPILGIAN	BBBAAALBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*10	98.6	Hu_IGHV1-69*10	100.0	H3	17	H3-17-*	-1	ARLPYYYdssGYYYFDY
E	heavy	Homo.sapiens	Hu_IGHV1-69*10	98.6	Hu_IGHV1-69*10	100.0	H4	8	H4-8-1	7	ADKSTSTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022