PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7QBG

#CDRs = 4; #Clusters = 7.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	69.2	H1	13	H1-13-1	22	AASGFTPGIYDIG	BBBLBBAAABBBB
E	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	80.0	H2	10	H2-10-1	19	CISSRGSSTN	BBBAAALBBB
E	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	0.0	H3	18	H3-18-*	-1	AAIYQPSNgcvlRPEYSY
E	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	87.5	H4	8	H4-8-*	-1	RDNVKNTV	BALAALBB
G	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	69.2	H1	13	H1-13-*	-1	AASGFTPGIYDIG	BBAABBAAABBBB
G	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	80.0	H2	10	H2-10-*	-1	CISSRgsSTN
G	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	0.0	H3	18	H3-18-*	-1	AAIYQPSNgcvlRPEYSY
G	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	87.5	H4	8	H4-8-1	20	RDNVKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022