PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7QBE

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	CDRLenMismatch	-1.0	H1	10	H1-10-*	-1	TASGRTGTMG
E	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-*	-1	SHKWVAGSTY	BBBABEBABB
E	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	100.0	H3	19	H3-19-*	-1	AASSQifygaTTSIKDFNS
E	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	87.5	H4	8	H4-8-1	13	RDNAKNTL	BBAAALBB
F	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	CDRLenMismatch	-1.0	H1	10	H1-10-*	-1	TASGRTGTMG
F	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	50.0	H2	10	H2-10-*	-1	SHKWVAGSTY	BBBABBLBBB
F	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	100.0	H3	19	H3-19-*	-1	AASSQifygaTTSIKDFNS
F	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	94.5	Al_IGHV3-3*01_VHH	87.5	H4	8	H4-8-1	10	RDNAKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022