PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7Q9P

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	93.3	H1	15	H1-15-*	-1	TVSGGSISssSHYWG	BBBABBAABAABBBB
E	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	77.8	H2	9	H2-9-*	-1	SIYYSESAY	BBBAAABBB
E	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	100.0	H3	15	H3-15-*	-1	ARVTEpRWTSCYFDY
E	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	87.5	H4	8	H4-8-1	13	IDTSKNQF	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	81.8	L1	11	L1-11-*	-1	RTSQSVTSYLA	BBBBBBBBBBB
F	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	87.5	L2	8	L2-8-*	-1	YDASDRAT	BLLBBBBB
F	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	85.7	L3	10	L3-10-*	-1	QLRSNWpPIT	BBBBABbBLB
F	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	100.0	L4	6	L4-6-*	-1	GSGTDF	BBBEBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	93.3	H1	15	H1-15-*	-1	TVSGGSISssSHYWG	BBBABBAABAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	77.8	H2	9	H2-9-*	-1	SIYYSESAY	BBBAAABBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	100.0	H3	15	H3-15-*	-1	ARVTEpRWTSCYFDY
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	87.5	H4	8	H4-8-1	13	IDTSKNQF	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	93.3	H1	15	H1-15-*	-1	TVSGGSISssSHYWG	BBBABBAABAABBBB
J	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	77.8	H2	9	H2-9-*	-1	SIYYSESAY	BBBAAABBB
J	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	100.0	H3	15	H3-15-*	-1	ARVTEpRWTSCYFDY
J	heavy	Homo.sapiens	Hu_IGHV4-39*01	91.8	Hu_IGHV4-39*01	87.5	H4	8	H4-8-1	13	IDTSKNQF	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	81.8	L1	11	L1-11-*	-1	RTSQSVTSYLA	BBBBBBBBBBB
K	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	87.5	L2	8	L2-8-*	-1	YDASDRAT	BLLBBBBB
K	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	85.7	L3	10	L3-10-*	-1	QLRSNWpPIT	BBBBABbBLB
K	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	100.0	L4	6	L4-6-*	-1	GSGTDF	BBBEBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	81.8	L1	11	L1-11-*	-1	RTSQSVTSYLA	BBBBBBBBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	87.5	L2	8	L2-8-*	-1	YDASDRAT	BLLBBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	85.7	L3	10	L3-10-*	-1	QLRSNWpPIT	BBBBABbBLB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	95.7	Hu_IGKV3-11*01	100.0	L4	6	L4-6-*	-1	GSGTDF	BBBABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022