PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7Q9M

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	95.9	Hu_IGHV5-10-1*01	69.2	H1	13	H1-13-*	-1	KGSGHNSPSYWIS	BBBLBABABBBBB
E	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	95.9	Hu_IGHV5-10-1*01	100.0	H2	10	H2-10-*	-1	RIDPSDSYTN	BBBAAALBBB
E	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	95.9	Hu_IGHV5-10-1*01	100.0	H3	14	H3-14-*	-1	ARHVVALTHLYPDY	BBBBBAEABBBBAB
E	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	95.9	Hu_IGHV5-10-1*01	100.0	H4	8	H4-8-1	7	ADKSISTA	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV3-15*01	97.1	Hu_IGKV3-15*01	90.9	L1	11	L1-11-1	12	RASQSVSSTLA	BBABBAEABBB
F	kappa	Homo.sapiens	Hu_IGKV3-15*01	97.1	Hu_IGKV3-15*01	100.0	L2	8	L2-8-1	14	YGASTRAT	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV3-15*01	97.1	Hu_IGKV3-15*01	85.7	L3	10	L3-10-*	-1	QQYNNWsTWT	BBABABBBBB
F	kappa	Homo.sapiens	Hu_IGKV3-15*01	97.1	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	8	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	95.9	Hu_IGHV5-10-1*01	69.2	H1	13	H1-13-*	-1	KGSGHNSPSYWIS	BBBLBABABBBBB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	95.9	Hu_IGHV5-10-1*01	100.0	H2	10	H2-10-*	-1	RIDPSDSYTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	95.9	Hu_IGHV5-10-1*01	100.0	H3	14	H3-14-*	-1	ARHVVALTHLYPDY	BBBBBAEABBBBAB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	95.9	Hu_IGHV5-10-1*01	100.0	H4	8	H4-8-1	6	ADKSISTA	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	95.9	Hu_IGHV5-10-1*01	69.2	H1	13	H1-13-*	-1	KGSGHNSPSYWIS	BBBLBABABBBBB
J	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	95.9	Hu_IGHV5-10-1*01	100.0	H2	10	H2-10-*	-1	RIDPSDSYTN	BBBAAALBBB
J	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	95.9	Hu_IGHV5-10-1*01	100.0	H3	14	H3-14-*	-1	ARHVVALTHLYPDY	BBBBBAEABBBBAB
J	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	95.9	Hu_IGHV5-10-1*01	100.0	H4	8	H4-8-1	7	ADKSISTA	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV3-15*01	97.1	Hu_IGKV3-15*01	90.9	L1	11	L1-11-1	12	RASQSVSSTLA	BBABBAEABBB
K	kappa	Homo.sapiens	Hu_IGKV3-15*01	97.1	Hu_IGKV3-15*01	100.0	L2	8	L2-8-1	13	YGASTRAT	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV3-15*01	97.1	Hu_IGKV3-15*01	85.7	L3	10	L3-10-*	-1	QQYNNWsTWT	BBABABBBBB
K	kappa	Homo.sapiens	Hu_IGKV3-15*01	97.1	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	9	GSGTEF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	97.1	Hu_IGKV3-15*01	90.9	L1	11	L1-11-*	-1	RASQSVSSTLA	BBBEBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	97.1	Hu_IGKV3-15*01	100.0	L2	8	L2-8-1	14	YGASTRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	97.1	Hu_IGKV3-15*01	85.7	L3	10	L3-10-*	-1	QQYNNWsTWT	BBABABBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	97.1	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	8	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022