PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7Q9J

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV4-59*01	93.2	Hu_IGHV4-59*01	84.6	H1	13	H1-13-4	10	TVSGASISNYYWS	BBBLBBABLBBBB
E	heavy	Homo.sapiens	Hu_IGHV4-59*01	93.2	Hu_IGHV4-59*01	88.9	H2	9	H2-9-1	7	YIYYTGSTN	BBBAALBBB
E	heavy	Homo.sapiens	Hu_IGHV4-59*01	93.2	Hu_IGHV4-59*01	100.0	H3	16	H3-16-*	-1	ARAYCSggSCFDTFDI
E	heavy	Homo.sapiens	Hu_IGHV4-59*01	93.2	Hu_IGHV4-59*01	87.5	H4	8	H4-8-1	12	LDTSKNQF	BBAAALBB
F	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	100.0	L1	11	L1-11-3	8	GGNNIGSKSVH	BEBLAAABBBB
F	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	100.0	L2	8	L2-8-1	15	YDDSDRPS	BLLABBBB
F	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	77.8	L3	11	L3-11-1	12	QVWDSASDSGV	BBBBAAALBBB
F	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	12	NSGNTA	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	93.2	Hu_IGHV4-59*01	84.6	H1	13	H1-13-4	10	TVSGASISNYYWS	BBBLBBABLBBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	93.2	Hu_IGHV4-59*01	88.9	H2	9	H2-9-1	7	YIYYTGSTN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	93.2	Hu_IGHV4-59*01	100.0	H3	16	H3-16-*	-1	ARAYCSggSCFDTFDI
H	heavy	Homo.sapiens	Hu_IGHV4-59*01	93.2	Hu_IGHV4-59*01	87.5	H4	8	H4-8-1	11	LDTSKNQF	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV4-59*01	93.2	Hu_IGHV4-59*01	84.6	H1	13	H1-13-4	10	TVSGASISNYYWS	BBBLBBABLBBBB
J	heavy	Homo.sapiens	Hu_IGHV4-59*01	93.2	Hu_IGHV4-59*01	88.9	H2	9	H2-9-1	7	YIYYTGSTN	BBBAALBBB
J	heavy	Homo.sapiens	Hu_IGHV4-59*01	93.2	Hu_IGHV4-59*01	100.0	H3	16	H3-16-*	-1	ARAYCSggSCFDTFDI
J	heavy	Homo.sapiens	Hu_IGHV4-59*01	93.2	Hu_IGHV4-59*01	87.5	H4	8	H4-8-1	11	LDTSKNQF	BBAAALBB
K	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	100.0	L1	11	L1-11-3	8	GGNNIGSKSVH	BEBLAAABBBB
K	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	100.0	L2	8	L2-8-1	15	YDDSDRPS	BLLABBBB
K	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	77.8	L3	11	L3-11-1	12	QVWDSASDSGV	BBBBAAALBBB
K	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	11	NSGNTA	BBEABB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	100.0	L1	11	L1-11-3	8	GGNNIGSKSVH	BEBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	100.0	L2	8	L2-8-1	15	YDDSDRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	77.8	L3	11	L3-11-1	12	QVWDSASDSGV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*02	95.5	Hu_IGLV3-21*02	100.0	L4	6	L4-6-2	11	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022