PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7Q9F

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV1-69*06	97.3	Hu_IGHV1-69*06	53.8	H1	13	H1-13-3	19	KASRGTFNTYVFT	BBBEAAAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*06	97.3	Hu_IGHV1-69*06	80.0	H2	10	H2-10-1	13	GIIPFFGTAD	BBBAAALBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*06	97.3	Hu_IGHV1-69*06	50.0	H3	11	H3-11-*	-1	SRLSQWDLLPM	BBBBAABBBBB
E	heavy	Homo.sapiens	Hu_IGHV1-69*06	97.3	Hu_IGHV1-69*06	87.5	H4	8	H4-8-1	11	ADDSTSTA	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSFtSSYLA	BBABBBAABBBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	18	YGASSRAT	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	85.7	L3	11	L3-11-*	-1	QQYGTSPrmYT	BBBBABAAABB
F	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	97.3	Hu_IGHV1-69*06	53.8	H1	13	H1-13-*	-1	KASRGTFNTYVFT	BBBEAAAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	97.3	Hu_IGHV1-69*06	80.0	H2	10	H2-10-1	16	GIIPFFGTAD	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	97.3	Hu_IGHV1-69*06	50.0	H3	11	H3-11-*	-1	SRLSQWDLLPM	BBBBAABBBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*06	97.3	Hu_IGHV1-69*06	87.5	H4	8	H4-8-1	11	ADDSTSTA	BBAAALBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*06	97.3	Hu_IGHV1-69*06	53.8	H1	13	H1-13-3	19	KASRGTFNTYVFT	BBBEAAAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*06	97.3	Hu_IGHV1-69*06	80.0	H2	10	H2-10-1	15	GIIPFFGTAD	BBBAAALBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*06	97.3	Hu_IGHV1-69*06	50.0	H3	11	H3-11-*	-1	SRLSQWDLLPM	BBBBAABBBBB
J	heavy	Homo.sapiens	Hu_IGHV1-69*06	97.3	Hu_IGHV1-69*06	87.5	H4	8	H4-8-1	11	ADDSTSTA	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSFtSSYLA	BBABBBAABBBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	20	YGASSRAT	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	85.7	L3	11	L3-11-*	-1	QQYGTSPrmYT	BBBBABAAABB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	13	GSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSFtSSYLA	BBABBBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	18	YGASSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	85.7	L3	11	L3-11-*	-1	QQYGTSPrmYT	BBBBABAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022