PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7Q0H

#CDRs = 8; #Clusters = 13.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	97.3	Hu_IGHV1-69*06	53.8	H1	13	H1-13-*	-1	KASRGTFNTYVFT	BBBEBAAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	97.3	Hu_IGHV1-69*06	80.0	H2	10	H2-10-1	11	GIIPFFGTAD	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	97.3	Hu_IGHV1-69*06	50.0	H3	11	H3-11-*	-1	SRLSQWDLLPM	BBBBAABBBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*06	97.3	Hu_IGHV1-69*06	87.5	H4	8	H4-8-1	7	ADDSTSTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	83.3	L1	12	L1-12-*	-1	RASQSFtSSYLA	BBABBBABBBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	19	YGASSRAT	BLLBBBBB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	85.7	L3	11	L3-11-*	-1	QQYGTSPrmYT	BBBBABAAABB
B	kappa	Homo.sapiens	Hu_IGKV3-20*01	95.7	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	97.3	CDRLenMismatch	-1.0	H1	15	H1-15-2	14	TVFGGSItsSNHYWV	BBBLEBABBAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	97.3	Hu_IGHV4-59*11	66.7	H2	9	H2-9-1	15	SMYYSGSTA	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	97.3	Hu_IGHV4-59*11	100.0	H3	18	H3-18-*	-1	ARQigpkRPSQVADWFDP
H	heavy	Homo.sapiens	Hu_IGHV4-59*11	97.3	Hu_IGHV4-59*11	100.0	H4	8	H4-8-1	11	VDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L1	11	L1-11-1	8	RASQGISSYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	6	YAASTLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L3	9	L3-9-cis7-1	11	QQLNSYPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L4	6	L4-6-1	10	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022