PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7PS7

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	100.0	H1	15	H1-15-*	-1	TVSGGSIssSSYYWG	BBBABBAABBABBBB
A	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	88.9	H2	9	H2-9-*	-1	SIYYSGSAY	BBBABABBB
A	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	100.0	H3	15	H3-15-*	-1	ARHAAPSpGDNWFDP
A	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	100.0	H4	8	H4-8-1	12	VDTSKNQF	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV3-25*02	95.4	Hu_IGLV3-25*02	54.5	L1	11	L1-11-4	23	SGDALSTQNGN	BEAAAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-25*02	95.4	Hu_IGLV3-25*02	87.5	L2	8	L2-8-*	-1	CKDSERPS	BLLABBBA
B	lambda	Homo.sapiens	Hu_IGLV3-25*02	95.4	Hu_IGLV3-25*02	44.4	L3	10	L3-10-*	-1	QSADNRAHVV	BBBBAALBBB
B	lambda	Homo.sapiens	Hu_IGLV3-25*02	95.4	Hu_IGLV3-25*02	83.3	L4	6	L4-6-2	10	RSGTTV	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	100.0	H1	15	H1-15-*	-1	TVSGGSIssSSYYWG	BBBABBAABBABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	88.9	H2	9	H2-9-*	-1	SIYYSGSAY	BBBABABBB
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	100.0	H3	15	H3-15-*	-1	ARHAAPSpGDNWFDP
H	heavy	Homo.sapiens	Hu_IGHV4-39*01	93.2	Hu_IGHV4-39*01	100.0	H4	8	H4-8-1	12	VDTSKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	95.4	Hu_IGLV3-25*02	54.5	L1	11	L1-11-4	23	SGDALSTQNGN	BEAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	95.4	Hu_IGLV3-25*02	87.5	L2	8	L2-8-*	-1	CKDSERPS	BLLABBBA
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	95.4	Hu_IGLV3-25*02	44.4	L3	10	L3-10-*	-1	QSADNRAHVV	BBBBAALBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	95.4	Hu_IGLV3-25*02	83.3	L4	6	L4-6-2	10	RSGTTV	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022