PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7PS2

#CDRs = 8; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-30*18	93.2	Hu_IGHV3-30*18	92.3	H1	13	H1-13-1	9	AASGFTFSNYGMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-30*18	93.2	Hu_IGHV3-30*18	60.0	H2	10	H2-10-2	23	LISYEESNRY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-30*18	93.2	Hu_IGHV3-30*18	100.0	H3	20	H3-20-*	-1	AKDQGpatvmvTAIRGAMDV
A	heavy	Homo.sapiens	Hu_IGHV3-30*18	93.2	Hu_IGHV3-30*18	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	100.0	L1	17	L1-17-*	-1	KSSQSVlyssnnKNYLA	BBABBBBBAAALBBBBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	7	YWASTRES	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	57.1	L3	10	L3-10-*	-1	QQYFGSPsIT	BBAALABEBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	97.1	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	95.9	Hu_IGHV5-10-1*01	69.2	H1	13	H1-13-*	-1	KGSGHNSPSYWIS	BBBLBABABBBBB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	95.9	Hu_IGHV5-10-1*01	100.0	H2	10	H2-10-1	26	RIDPSDSYTN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	95.9	Hu_IGHV5-10-1*01	100.0	H3	14	H3-14-*	-1	ARHVVALTHLYPDY	BBBBBBEABBBBBB
H	heavy	Homo.sapiens	Hu_IGHV5-10-1*01	95.9	Hu_IGHV5-10-1*01	100.0	H4	8	H4-8-1	7	ADKSISTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	97.1	Hu_IGKV3-15*01	90.9	L1	11	L1-11-1	17	RASQSVSSTLA	BBABBAEAABB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	97.1	Hu_IGKV3-15*01	100.0	L2	8	L2-8-1	6	YGASTRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	97.1	Hu_IGKV3-15*01	85.7	L3	10	L3-10-*	-1	QQYNNWsTWT	BBABABBBBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	97.1	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	8	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022